RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ECSITQ9BQ95 431 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 RIOK1Q9BRS2 568 aaKnown RBP7.92□□□□□ -1.14
CPSF6-202ENST00000435070 TBX22Q9Y458 520 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 PCDHA3Q9Y5H8 950 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 DIP2AQ14689 1571 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 PENKP01210 267 aaPredicted RBP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 ENO1P06733 434 aaKnown RBP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 TMEM253P0C7T8 217 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 TROVE2P10155 538 aaKnown RBP eCLIP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 SLC13A5Q86YT5 568 aaPredicted RBP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 VPS37BQ9H9H4 285 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 PAIP2BQ9ULR5 123 aaKnown RBP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 FGFR2P21802 821 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 HIRAP54198 1017 aaPredicted RBP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 SFSWAPQ12872 951 aaKnown RBP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 CDC16Q13042 620 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 LPCAT4Q643R3 524 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 SCUBE1Q8IWY4 988 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 RAB34Q9BZG1 259 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 DNAJC18Q9H819 358 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 METTL14Q9HCE5 456 aaKnown RBP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 PCYOX1Q9UHG3 505 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 PPM1HQ9ULR3 514 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 TOPAZ1Q8N9V7 1692 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 A0A0A6YYK5 440 aaPredicted RBP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 TRIM49P0CI25 452 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 TRIM49CP0CI26 452 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 ANPEPP15144 967 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 EIF4BP23588 611 aaKnown RBP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 ACAP1Q15027 740 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 KCTD21Q4G0X4 260 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 LRRC6Q86X45 466 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 NME8Q8N427 588 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 ZNF75CPQ92670 426 aaPredicted RBP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 DDX17Q92841 729 aaKnown RBP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 HSPBAP1Q96EW2 488 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 NGLY1Q96IV0 654 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 SMYD3Q9H7B4 428 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 ANGPTL2Q9UKU9 493 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 ATF2P15336 505 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 LMNB1P20700 586 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 ADRA1DP25100 572 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 PRKCIP41743 596 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 MAPK6Q16659 721 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 RBM44Q6ZP01 1051 aaKnown RBP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 ARHGAP27Q6ZUM4 889 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 DGKHQ86XP1 1220 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 PYDC1Q8WXC3 89 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 OLFM3Q96PB7 478 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 PIGSQ96S52 555 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 HAPLN3Q96S86 360 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 ZSWIM1Q9BR11 485 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 MIS12Q9H081 205 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 DDX60Q8IY21 1712 aaKnown RBP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 LRP6O75581 1613 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 SLC44A4Q53GD3 710 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 COBLL1Q53SF7 1204 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 C1orf146Q5VVC0 180 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 DPY19L2Q6NUT2 758 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 CCDC174Q6PII3 467 aa7.91□□□□□ -1.14
CPSF6-202ENST00000435070 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.91□□□□□ -1.14
CPSF6-202ENST00000435070 PLA2G4BP0C869 781 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 ARFIP2P53365 341 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 PABPC4Q13310 644 aaKnown RBP eCLIP7.9□□□□□ -1.142e-6■□□□□ 9.6
CPSF6-202ENST00000435070 MED21Q13503 144 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 ZYXQ15942 572 aaKnown RBP7.9□□□□□ -1.14
CPSF6-202ENST00000435070 UBE2SQ16763 222 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 DNAJC14Q6Y2X3 702 aaPredicted RBP7.9□□□□□ -1.14
CPSF6-202ENST00000435070 SHKBP1Q8TBC3 707 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 SAYSD1Q9NPB0 183 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 IL17RBQ9NRM6 502 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 MAD2L2Q9UI95 211 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 MROH7Q68CQ1 1323 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 ARHGAP42A6NI28 874 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 C6orf229H3BNL8 230 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 DNAJC6O75061 913 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 SOX5P35711 763 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 CCR3P51677 355 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 HPCAP84074 193 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 PLOD1Q02809 727 aaPredicted RBP7.9□□□□□ -1.14
CPSF6-202ENST00000435070 SLC45A4Q5BKX6 768 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 RAPH1Q70E73 1250 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 SLC5A5Q92911 643 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 CCDC124Q96CT7 223 aaKnown RBP7.9□□□□□ -1.14
CPSF6-202ENST00000435070 ERLEC1Q96DZ1 483 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 NR1H4Q96RI1 486 aaPredicted RBP7.9□□□□□ -1.14
CPSF6-202ENST00000435070 ZNF212Q9UDV6 495 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 TRAF3IP3Q9Y228 551 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 LMO7Q8WWI1 1683 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 MYOCOSA0A1B0GUC4 107 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 TSPY3P0CV98 308 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 TSPY8P0CW00 308 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 GNA11P29992 359 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 STAT3P40763 770 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 NPEPPSP55786 919 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 EPHA7Q15375 998 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 RIPOR1Q6ZS17 1223 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 KCTD10Q9H3F6 313 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 SIX2Q9NPC8 291 aa7.9□□□□□ -1.14
CPSF6-202ENST00000435070 DCP1AQ9NPI6 582 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms