RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 ZBTB42B2RXF5 422 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 GOLGA8KD6RF30 607 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 DAPK3O43293 454 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 BBXQ8WY36 941 aaPredicted RBP25.47■■□□□ 1.67
MBD3-202ENST00000434436 GLG1Q92896 1179 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 OPTNQ96CV9 577 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 PCDHB2Q9Y5E7 798 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 GOLGA6CA6NDK9 693 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 GOLGA6DP0CG33 693 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 HARSP12081 509 aaKnown RBP25.47■■□□□ 1.67
MBD3-202ENST00000434436 NF2P35240 595 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 TTMPQ5BVD1 217 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 C9orf131Q5VYM1 1079 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 SCARA3Q6AZY7 606 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 GOLGA6L1Q8N7Z2 621 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 UPF1Q92900 1129 aaKnown RBP eCLIP25.47■■□□□ 1.672e-7■■■■■ 50.7
MBD3-202ENST00000434436 RUFY1Q96T51 708 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 CCDC113Q9H0I3 377 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 GOLGA6AQ9NYA3 693 aa25.47■■□□□ 1.67
MBD3-202ENST00000434436 MSCO60682 206 aa25.46■■□□□ 1.67
MBD3-202ENST00000434436 CAPN2P17655 700 aa25.46■■□□□ 1.67
MBD3-202ENST00000434436 IER5Q5VY09 327 aa25.46■■□□□ 1.67
MBD3-202ENST00000434436 GPAT2Q6NUI2 795 aa25.46■■□□□ 1.67
MBD3-202ENST00000434436 ZPBP2Q6X784 338 aa25.46■■□□□ 1.67
MBD3-202ENST00000434436 MMP19Q99542 508 aa25.46■■□□□ 1.67
MBD3-202ENST00000434436 TRIM51Q9BSJ1 452 aa25.46■■□□□ 1.67
MBD3-202ENST00000434436 CUL2Q13617 745 aa25.46■■□□□ 1.67
MBD3-202ENST00000434436 FBXO16Q8IX29 292 aaPredicted RBP25.46■■□□□ 1.67
MBD3-202ENST00000434436 ZDHHC14Q8IZN3 488 aa25.46■■□□□ 1.67
MBD3-202ENST00000434436 PPME1Q9Y570 386 aa25.46■■□□□ 1.67
MBD3-202ENST00000434436 FAM189A1O60320 539 aa25.45■■□□□ 1.67
MBD3-202ENST00000434436 PYGMP11217 842 aa25.45■■□□□ 1.67
MBD3-202ENST00000434436 CTNNA1P35221 906 aaKnown RBP25.45■■□□□ 1.67
MBD3-202ENST00000434436 TNFSF9P41273 254 aa25.45■■□□□ 1.67
MBD3-202ENST00000434436 CLUL1Q15846 466 aa25.45■■□□□ 1.67
MBD3-202ENST00000434436 TMEM63BQ5T3F8 832 aa25.45■■□□□ 1.67
MBD3-202ENST00000434436 KCNV1Q6PIU1 500 aa25.45■■□□□ 1.67
MBD3-202ENST00000434436 ZNF677Q86XU0 584 aa25.45■■□□□ 1.67
MBD3-202ENST00000434436 MCOLN2Q8IZK6 566 aa25.45■■□□□ 1.67
MBD3-202ENST00000434436 FAM76AQ8TAV0 307 aa25.45■■□□□ 1.67
MBD3-202ENST00000434436 MPHOSPH6Q99547 160 aaKnown RBP25.45■■□□□ 1.67
MBD3-202ENST00000434436 UMODL1Q5DID0 1318 aa25.45■■□□□ 1.66
MBD3-202ENST00000434436 GOLGA6L10A0A0M3HER8 536 aa25.45■■□□□ 1.66
MBD3-202ENST00000434436 CLDN3O15551 220 aa25.45■■□□□ 1.66
MBD3-202ENST00000434436 YBX3P16989 372 aaKnown RBP eCLIP25.45■■□□□ 1.66
MBD3-202ENST00000434436 CTNNA2P26232 953 aa25.45■■□□□ 1.66
MBD3-202ENST00000434436 LAMTOR4Q0VGL1 99 aa25.45■■□□□ 1.66
MBD3-202ENST00000434436 KCTD2Q14681 263 aa25.45■■□□□ 1.66
MBD3-202ENST00000434436 CDCA2Q69YH5 1023 aaPredicted RBP25.45■■□□□ 1.66
MBD3-202ENST00000434436 CCDC62Q6P9F0 684 aa25.45■■□□□ 1.66
MBD3-202ENST00000434436 LRRC71Q8N4P6 559 aa25.45■■□□□ 1.66
MBD3-202ENST00000434436 COPS5Q92905 334 aa25.45■■□□□ 1.66
MBD3-202ENST00000434436 PCDHA3Q9Y5H8 950 aa25.45■■□□□ 1.66
MBD3-202ENST00000434436 IGKV6-21A0A0C4DH24 114 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 SPOPO43791 374 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 KRT14P02533 472 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 SRGAP2CP0DJJ0 459 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 PPFIA1Q13136 1202 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 PLCB4Q15147 1175 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 PPP2R5EQ16537 467 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 ATP8B4Q8TF62 1192 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 CPA5Q8WXQ8 436 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 DPH5Q9H2P9 285 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 UTP11Q9Y3A2 253 aaKnown RBP25.44■■□□□ 1.66
MBD3-202ENST00000434436 NUB1Q9Y5A7 615 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 NOP56O00567 594 aaKnown RBP25.44■■□□□ 1.66
MBD3-202ENST00000434436 CYP1A1P04798 512 aaPredicted RBP25.44■■□□□ 1.66
MBD3-202ENST00000434436 CLTAP09496 248 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 FLT3P36888 993 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 EFNA5P52803 228 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 BPIFB4P59827 614 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 PLPPR4Q7Z2D5 763 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 ZBTB33Q86T24 672 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 BRSK2Q8IWQ3 736 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 PRELID2Q8N945 189 aa25.44■■□□□ 1.66
MBD3-202ENST00000434436 CFHP08603 1231 aa25.43■■□□□ 1.66
MBD3-202ENST00000434436 OSBPP22059 807 aa25.43■■□□□ 1.66
MBD3-202ENST00000434436 ACTN2P35609 894 aa25.43■■□□□ 1.66
MBD3-202ENST00000434436 DR1Q01658 176 aa25.43■■□□□ 1.66
MBD3-202ENST00000434436 CD302Q8IX05 232 aa25.43■■□□□ 1.66
MBD3-202ENST00000434436 SPATA33Q96N06 139 aa25.43■■□□□ 1.66
MBD3-202ENST00000434436 ACO2Q99798 780 aaKnown RBP25.43■■□□□ 1.66
MBD3-202ENST00000434436 MRPL4Q9BYD3 311 aaKnown RBP25.43■■□□□ 1.66
MBD3-202ENST00000434436 CCDC66A2RUB6 948 aa25.43■■□□□ 1.66
MBD3-202ENST00000434436 GJA5P36382 358 aa25.43■■□□□ 1.66
MBD3-202ENST00000434436 USP50Q70EL3 339 aaPredicted RBP25.43■■□□□ 1.66
MBD3-202ENST00000434436 FASTKD5Q7L8L6 764 aaKnown RBP25.43■■□□□ 1.66
MBD3-202ENST00000434436 RNF149Q8NC42 400 aa25.43■■□□□ 1.66
MBD3-202ENST00000434436 CYFIP2Q96F07 1278 aa25.43■■□□□ 1.66
MBD3-202ENST00000434436 FAM114A2Q9NRY5 505 aa25.43■■□□□ 1.66
MBD3-202ENST00000434436 PCDHB4Q9Y5E5 795 aa25.43■■□□□ 1.66
MBD3-202ENST00000434436 TOM1L1O75674 476 aa25.42■■□□□ 1.66
MBD3-202ENST00000434436 NOP14P78316 857 aaKnown RBP25.42■■□□□ 1.66
MBD3-202ENST00000434436 UAP1Q16222 522 aaPredicted RBP25.42■■□□□ 1.66
MBD3-202ENST00000434436 SEL1L2Q5TEA6 688 aa25.42■■□□□ 1.66
MBD3-202ENST00000434436 WDR78Q5VTH9 848 aa25.42■■□□□ 1.66
MBD3-202ENST00000434436 DHX37Q8IY37 1157 aaKnown RBP25.42■■□□□ 1.66
MBD3-202ENST00000434436 TCP11Q8WWU5 503 aa25.42■■□□□ 1.66
MBD3-202ENST00000434436 TRIM7Q9C029 511 aa25.42■■□□□ 1.66
MBD3-202ENST00000434436 AVENQ9NQS1 362 aaPredicted RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms