RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.61■■■□□ 2.17
TMEM248-205ENST00000433271 ENPP3O14638 875 aa28.61■■■□□ 2.17
TMEM248-205ENST00000433271 PON1P27169 355 aa28.61■■■□□ 2.17
TMEM248-205ENST00000433271 KLK7P49862 253 aa28.61■■■□□ 2.17
TMEM248-205ENST00000433271 TMEM132DQ14C87 1099 aa28.61■■■□□ 2.17
TMEM248-205ENST00000433271 EPC2Q52LR7 807 aa28.61■■■□□ 2.17
TMEM248-205ENST00000433271 TDRD10Q5VZ19 366 aaKnown RBP28.61■■■□□ 2.17
TMEM248-205ENST00000433271 ANKRD36BP1Q96IX9 119 aa28.61■■■□□ 2.17
TMEM248-205ENST00000433271 EOMESO95936 686 aa28.6■■■□□ 2.17
TMEM248-205ENST00000433271 TMEM191BP0C7N4 346 aa28.6■■■□□ 2.17
TMEM248-205ENST00000433271 KCNE1P15382 129 aa28.6■■■□□ 2.17
TMEM248-205ENST00000433271 ATF7P17544 494 aaPredicted RBP28.6■■■□□ 2.17
TMEM248-205ENST00000433271 AGMOQ6ZNB7 445 aa28.6■■■□□ 2.17
TMEM248-205ENST00000433271 ZNF598Q86UK7 904 aaKnown RBP28.6■■■□□ 2.17
TMEM248-205ENST00000433271 TMEM199Q8N511 208 aa28.6■■■□□ 2.17
TMEM248-205ENST00000433271 FBXL13Q8NEE6 735 aa28.6■■■□□ 2.17
TMEM248-205ENST00000433271 VWCEQ96DN2 955 aa28.6■■■□□ 2.17
TMEM248-205ENST00000433271 FAM84AQ96KN4 292 aa28.6■■■□□ 2.17
TMEM248-205ENST00000433271 NUP58Q9BVL2 599 aa28.6■■■□□ 2.17
TMEM248-205ENST00000433271 MTMR12Q9C0I1 747 aa28.6■■■□□ 2.17
TMEM248-205ENST00000433271 CXCL16Q9H2A7 254 aa28.6■■■□□ 2.17
TMEM248-205ENST00000433271 UBN1Q9NPG3 1134 aa28.6■■■□□ 2.17
TMEM248-205ENST00000433271 IMPACTQ9P2X3 320 aa28.6■■■□□ 2.17
TMEM248-205ENST00000433271 PRKAG2Q9UGJ0 569 aa28.6■■■□□ 2.17
TMEM248-205ENST00000433271 MEIS3P2A8K0S8 358 aa28.59■■■□□ 2.17
TMEM248-205ENST00000433271 TNNC2P02585 160 aa28.59■■■□□ 2.17
TMEM248-205ENST00000433271 SLC9A1P19634 815 aa28.59■■■□□ 2.17
TMEM248-205ENST00000433271 BIRC3Q13489 604 aa28.59■■■□□ 2.17
TMEM248-205ENST00000433271 TCTN1Q2MV58 587 aa28.59■■■□□ 2.17
TMEM248-205ENST00000433271 TRAPPC11Q7Z392 1133 aa28.59■■■□□ 2.17
TMEM248-205ENST00000433271 EHBP1Q8NDI1 1231 aa28.59■■■□□ 2.17
TMEM248-205ENST00000433271 LMO3Q8TAP4 145 aa28.59■■■□□ 2.17
TMEM248-205ENST00000433271 LPPQ93052 612 aa28.59■■■□□ 2.17
TMEM248-205ENST00000433271 KIF12Q96FN5 646 aa28.59■■■□□ 2.17
TMEM248-205ENST00000433271 ZMAT2Q96NC0 199 aaKnown RBP28.59■■■□□ 2.17
TMEM248-205ENST00000433271 PLCB1Q9NQ66 1216 aa28.59■■■□□ 2.17
TMEM248-205ENST00000433271 SMIM28A0A1B0GU29 152 aa28.58■■■□□ 2.17
TMEM248-205ENST00000433271 TBX2Q13207 712 aaPredicted RBP28.58■■■□□ 2.17
TMEM248-205ENST00000433271 ZBTB6Q15916 424 aa28.58■■■□□ 2.17
TMEM248-205ENST00000433271 CNKSR3Q6P9H4 555 aa28.58■■■□□ 2.17
TMEM248-205ENST00000433271 TAS1R2Q8TE23 839 aa28.58■■■□□ 2.17
TMEM248-205ENST00000433271 HTATIP2Q9BUP3 242 aa28.58■■■□□ 2.17
TMEM248-205ENST00000433271 LSM14BQ9BX40 385 aaKnown RBP28.58■■■□□ 2.17
TMEM248-205ENST00000433271 FAM207AQ9NSI2 230 aaPredicted RBP28.58■■■□□ 2.17
TMEM248-205ENST00000433271 RAB20Q9NX57 234 aa28.58■■■□□ 2.17
TMEM248-205ENST00000433271 RALGAPA2Q2PPJ7 1873 aa28.58■■■□□ 2.17
TMEM248-205ENST00000433271 PHACTR2O75167 634 aa28.58■■■□□ 2.17
TMEM248-205ENST00000433271 CSF2RAP15509 400 aa28.58■■■□□ 2.17
TMEM248-205ENST00000433271 TRIM21P19474 475 aaKnown RBP28.58■■■□□ 2.17
TMEM248-205ENST00000433271 FIGNQ5HY92 759 aa28.58■■■□□ 2.17
TMEM248-205ENST00000433271 TRIM65Q6PJ69 517 aa28.58■■■□□ 2.17
TMEM248-205ENST00000433271 RPUSD2Q8IZ73 545 aaKnown RBP28.58■■■□□ 2.17
TMEM248-205ENST00000433271 RNF169Q8NCN4 708 aa28.58■■■□□ 2.17
TMEM248-205ENST00000433271 IQCDQ96DY2 449 aa28.58■■■□□ 2.17
TMEM248-205ENST00000433271 INTS2Q9H0H0 1204 aaKnown RBP28.58■■■□□ 2.17
TMEM248-205ENST00000433271 ALPK3Q96L96 1907 aa28.57■■■□□ 2.16
TMEM248-205ENST00000433271 TRIM14Q14142 442 aa28.57■■■□□ 2.16
TMEM248-205ENST00000433271 DPY19L2P1Q6NXN4 242 aa28.57■■■□□ 2.16
TMEM248-205ENST00000433271 NEK11Q8NG66 645 aa28.57■■■□□ 2.16
TMEM248-205ENST00000433271 SEMA4DQ92854 862 aa28.57■■■□□ 2.16
TMEM248-205ENST00000433271 GAD1Q99259 594 aa28.57■■■□□ 2.16
TMEM248-205ENST00000433271 ELAC1Q9H777 363 aaKnown RBP28.57■■■□□ 2.16
TMEM248-205ENST00000433271 RSAD1Q9HA92 442 aa28.57■■■□□ 2.16
TMEM248-205ENST00000433271 GOLGA6L6A8MZA4 724 aa28.56■■■□□ 2.16
TMEM248-205ENST00000433271 VNN1O95497 513 aa28.56■■■□□ 2.16
TMEM248-205ENST00000433271 PFKMP08237 780 aa28.56■■■□□ 2.16
TMEM248-205ENST00000433271 MLH1P40692 756 aa28.56■■■□□ 2.16
TMEM248-205ENST00000433271 IKBKEQ14164 716 aa28.56■■■□□ 2.16
TMEM248-205ENST00000433271 PPFIBP1Q86W92 1011 aa28.56■■■□□ 2.16
TMEM248-205ENST00000433271 ZFP42Q96MM3 310 aa28.56■■■□□ 2.16
TMEM248-205ENST00000433271 TMEM161AQ9NX61 479 aa28.56■■■□□ 2.16
TMEM248-205ENST00000433271 TRIP11Q15643 1979 aa28.56■■■□□ 2.16
TMEM248-205ENST00000433271 ARL5CA6NH57 179 aa28.55■■■□□ 2.16
TMEM248-205ENST00000433271 CCDC85CA6NKD9 419 aa28.55■■■□□ 2.16
TMEM248-205ENST00000433271 HLA-DRAP01903 254 aa28.55■■■□□ 2.16
TMEM248-205ENST00000433271 ACTN1P12814 892 aa28.55■■■□□ 2.16
TMEM248-205ENST00000433271 PIK3CAP42336 1068 aa28.55■■■□□ 2.16
TMEM248-205ENST00000433271 NCOA4Q13772 614 aa28.55■■■□□ 2.16
TMEM248-205ENST00000433271 KLHDC7AQ5VTJ3 777 aa28.55■■■□□ 2.16
TMEM248-205ENST00000433271 C7orf61Q8IZ16 206 aa28.55■■■□□ 2.16
TMEM248-205ENST00000433271 C1orf127Q8N9H9 656 aa28.55■■■□□ 2.16
TMEM248-205ENST00000433271 GSTCDQ8NEC7 633 aa28.55■■■□□ 2.16
TMEM248-205ENST00000433271 TTYH3Q9C0H2 523 aa28.55■■■□□ 2.16
TMEM248-205ENST00000433271 SIX2Q9NPC8 291 aa28.55■■■□□ 2.16
TMEM248-205ENST00000433271 DPP3Q9NY33 737 aa28.55■■■□□ 2.16
TMEM248-205ENST00000433271 UBQLN1Q9UMX0 589 aaKnown RBP28.55■■■□□ 2.16
TMEM248-205ENST00000433271 NOL4O94818 638 aa28.54■■■□□ 2.16
TMEM248-205ENST00000433271 GYPCP04921 128 aa28.54■■■□□ 2.16
TMEM248-205ENST00000433271 IBSPP21815 317 aaPredicted RBP28.54■■■□□ 2.16
TMEM248-205ENST00000433271 GLRA4Q5JXX5 417 aa28.54■■■□□ 2.16
TMEM248-205ENST00000433271 RNF216Q9NWF9 866 aaPredicted RBP28.54■■■□□ 2.16
TMEM248-205ENST00000433271 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.54■■■□□ 2.16
TMEM248-205ENST00000433271 PTGESO14684 152 aa28.54■■■□□ 2.16
TMEM248-205ENST00000433271 EPHB6O15197 1021 aa28.54■■■□□ 2.16
TMEM248-205ENST00000433271 XPOTO43592 962 aaKnown RBP28.54■■■□□ 2.16
TMEM248-205ENST00000433271 LRRN2O75325 713 aa28.54■■■□□ 2.16
TMEM248-205ENST00000433271 CST3P01034 146 aaPredicted RBP28.54■■■□□ 2.16
TMEM248-205ENST00000433271 TPM1P09493 284 aa28.54■■■□□ 2.16
TMEM248-205ENST00000433271 TRPC3Q13507 836 aa28.54■■■□□ 2.16
TMEM248-205ENST00000433271 BEST2Q8NFU1 509 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms