RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 UBAP1LF5GYI3 381 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 IFRD1O00458 451 aaPredicted RBP11.54□□□□□ -0.56
CCDC171-202ENST00000432954 CLOCKO15516 846 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 TRMUO75648 421 aaKnown RBP11.54□□□□□ -0.56
CCDC171-202ENST00000432954 APBB3O95704 486 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 NCAM1P13591 858 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 FECHP22830 423 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 CXCR2P25025 360 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 STX2P32856 288 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 PHKA2P46019 1235 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 RAC1P63000 192 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 ADAM17P78536 824 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 ENPEPQ07075 957 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 PTK2BQ14289 1009 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 SMU1Q2TAY7 513 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 ZBTB41Q5SVQ8 909 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 CCNJQ5T5M9 372 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 RAD9BQ6WBX8 426 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 LRRC74BQ6ZQY2 392 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 MIER3Q7Z3K6 550 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 ELMOD2Q8IZ81 293 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 CCNYL1Q8N7R7 359 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 SLC17A8Q8NDX2 589 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 FAM13CQ8NE31 585 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 PRPF31Q8WWY3 499 aaKnown RBP11.54□□□□□ -0.56
CCDC171-202ENST00000432954 DYDC2Q96IM9 177 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 CCDC138Q96M89 665 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 TM9SF2Q99805 663 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 PITHD1Q9GZP4 211 aaPredicted RBP11.54□□□□□ -0.56
CCDC171-202ENST00000432954 C10orf88Q9H8K7 445 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 HPS4Q9NQG7 708 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 MAN1C1Q9NR34 630 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 DMGDHQ9UI17 866 aaKnown RBP11.54□□□□□ -0.56
CCDC171-202ENST00000432954 POLHQ9Y253 713 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 C9orf84Q5VXU9 1444 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 AP1G1O43747 822 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 SIN3BO75182 1162 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 POP4O95707 220 aaKnown RBP11.54□□□□□ -0.56
CCDC171-202ENST00000432954 HMGN1P05114 100 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 MYZAPP0CAP1 466 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 GRIA2P42262 883 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 VAV2P52735 878 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 MYL6P60660 151 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 DAB2P98082 770 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 IFITM2Q01629 132 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 LRRC74AQ0VAA2 488 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 TAF12Q16514 161 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 DPCR1Q3MIW9 517 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 KCNT1Q5JUK3 1230 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 IQSEC1Q6DN90 963 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 DCLRE1AQ6PJP8 1040 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 ACAD11Q709F0 780 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 CCDC84Q86UT8 332 aaPredicted RBP11.54□□□□□ -0.56
CCDC171-202ENST00000432954 SATL1Q86VE3 508 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 NLRP10Q86W26 655 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 ALLCQ8N6M5 410 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 RASSF5Q8WWW0 418 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 DHX38Q92620 1227 aaKnown RBP11.54□□□□□ -0.56
CCDC171-202ENST00000432954 INPP5DQ92835 1189 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 INPP4AQ96PE3 977 aaPredicted RBP11.54□□□□□ -0.56
CCDC171-202ENST00000432954 KCTD10Q9H3F6 313 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 RXFP1Q9HBX9 757 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 TXLNGQ9NUQ3 528 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 TRPM5Q9NZQ8 1165 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 KIF17Q9P2E2 1029 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 TBC1D14Q9P2M4 693 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 ATP6V1HQ9UI12 483 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 EDARQ9UNE0 448 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 UMODL1Q5DID0 1318 aa11.54□□□□□ -0.56
CCDC171-202ENST00000432954 CYP2D7A0A087X1C5 515 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 TLDC2A0PJX2 215 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 SMCO2A6NFE2 343 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 H3BQV1 296 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 BET1O15155 118 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 RNMTO43148 476 aaKnown RBP11.53□□□□□ -0.56
CCDC171-202ENST00000432954 UNC5CO95185 931 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 SRGNP10124 158 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 LMOD1P29536 600 aaPredicted RBP11.53□□□□□ -0.56
CCDC171-202ENST00000432954 PTK2Q05397 1052 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 SLC34A1Q06495 639 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 MOGSQ13724 837 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 ZNF124Q15973 351 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 CCDC6Q16204 474 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 PLBD1Q6P4A8 553 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 ARHGAP36Q6ZRI8 547 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 CCDC28AQ8IWP9 274 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 SYTL1Q8IYJ3 562 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 ZNF565Q8N9K5 539 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 TNIP3Q96KP6 325 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 TTC25Q96NG3 672 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 USB1Q9BQ65 265 aaKnown RBP11.53□□□□□ -0.56
CCDC171-202ENST00000432954 CLPBQ9H078 707 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 CCDC113Q9H0I3 377 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 ETNK1Q9HBU6 452 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 NLRC4Q9NPP4 1024 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 GPRC5BQ9NZH0 403 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 ZNF212Q9UDV6 495 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 PCDHB13Q9Y5F0 798 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 ASXL1Q8IXJ9 1541 aa11.53□□□□□ -0.56
CCDC171-202ENST00000432954 LRRIQ1Q96JM4 1722 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms