RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 Q6ZPA2 131 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 ARHGEF19Q8IW93 802 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 RHOT1Q8IXI2 618 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 CBARPQ8N350 705 aaPredicted RBP4.53□□□□□ -1.68
CLK1-204ENST00000432425 LCORLQ8N3X6 602 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 OR56A1Q8NGH5 318 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 OR2I1PQ8NGU4 316 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 FAXDC2Q96IV6 333 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 NEU1Q99519 415 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 WDR11Q9BZH6 1224 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 RUVBL1Q9Y265 456 aaKnown RBP4.53□□□□□ -1.68
CLK1-204ENST00000432425 MAP3K2Q9Y2U5 619 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 MRFAP1Q9Y605 127 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 KLHL33A6NCF5 533 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 UNC119BA6NIH7 251 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 ALG1L2C9J202 215 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 RHOBTB3O94955 611 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 GCP02774 474 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 DDCP20711 480 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 PCSK1P29120 753 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 CREMQ03060 361 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 MTM1Q13496 603 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 MTMR1Q13613 665 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 UBXN2BQ14CS0 331 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 SPDYE7PQ495Y7 208 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 ARMC6Q6NXE6 501 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 SEM1Q6ZVN7 128 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 RSPH3Q86UC2 560 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 JADE3Q92613 823 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 RNPEPQ9H4A4 650 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 SERHL2Q9H4I8 314 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 KLHL11Q9NVR0 708 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 C11orf21Q9P2W6 132 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 NOX1Q9Y5S8 564 aa4.52□□□□□ -1.69
CLK1-204ENST00000432425 SHTN1A0MZ66 631 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 KATNA1O75449 491 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 CFIP05156 583 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 ZEB1P37275 1124 aaPredicted RBP4.51□□□□□ -1.69
CLK1-204ENST00000432425 WASP42768 502 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 AVPR1BP47901 424 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 USP14P54578 494 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 AMPD3Q01432 767 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 TAP1Q03518 808 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 RESTQ13127 1097 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 SMN1Q16637 294 aaKnown RBP4.51□□□□□ -1.69
CLK1-204ENST00000432425 UBE3BQ7Z3V4 1068 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 MAPKAPK5Q8IW41 473 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 PRPF38AQ8NAV1 312 aaKnown RBP4.51□□□□□ -1.69
CLK1-204ENST00000432425 SUPT20HQ8NEM7 779 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 AGAP2Q99490 1192 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 RNF181Q9P0P0 153 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 TUBD1Q9UJT1 453 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 MYBBP1AQ9BQG0 1328 aaKnown RBP4.51□□□□□ -1.69
CLK1-204ENST00000432425 GRID2IPA4D2P6 1211 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 KIAA0391O15091 583 aaKnown RBP4.51□□□□□ -1.69
CLK1-204ENST00000432425 CDKL5O76039 1030 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 AMY1AP04745 511 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 C5AR1P21730 350 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 HECTD2Q5U5R9 776 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 PNMA8AQ86V59 439 aaPredicted RBP4.51□□□□□ -1.69
CLK1-204ENST00000432425 ZGPATQ8N5A5 531 aaKnown RBP4.51□□□□□ -1.69
CLK1-204ENST00000432425 HDAC10Q969S8 669 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 RNF31Q96EP0 1072 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 TMX3Q96JJ7 454 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 MYOCQ99972 504 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 ZSWIM1Q9BR11 485 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 CCDC8Q9H0W5 538 aaPredicted RBP4.51□□□□□ -1.69
CLK1-204ENST00000432425 TDP1Q9NUW8 608 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 FBXO34Q9NWN3 711 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 FAM30AQ9NZY2 134 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 SLC23A1Q9UHI7 598 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 PACSIN3Q9UKS6 424 aa4.51□□□□□ -1.69
CLK1-204ENST00000432425 COL4A3Q01955 1670 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 A0A1B0GTW7 788 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 TCRBV7S2A1N4TA0A589 114 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 FOSP01100 380 aaPredicted RBP4.5□□□□□ -1.69
CLK1-204ENST00000432425 GCSHP23434 173 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 SLC6A2P23975 617 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 CTXN1P60606 82 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 TP53BP2Q13625 1128 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 FOXR2Q6PJQ5 311 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 PCSK4Q6UW60 755 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 Q6YL49 198 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 CMTR2Q8IYT2 770 aaKnown RBP4.5□□□□□ -1.69
CLK1-204ENST00000432425 TMEM132CQ8N3T6 1108 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 FITM2Q8N6M3 262 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 BEND2Q8NDZ0 799 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 ZCRB1Q8TBF4 217 aaKnown RBP4.5□□□□□ -1.69
CLK1-204ENST00000432425 ZG16BQ96DA0 208 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 TEKT5Q96M29 485 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 ADAM2Q99965 735 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 C11orf54Q9H0W9 315 aaPredicted RBP4.5□□□□□ -1.69
CLK1-204ENST00000432425 DKK2Q9UBU2 259 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 COL4A3BPQ9Y5P4 624 aa4.5□□□□□ -1.69
CLK1-204ENST00000432425 MARCH11A6NNE9 402 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 GABRDO14764 452 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 PCDHGA12O60330 932 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 SPDEFO95238 335 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 GPANK1O95872 356 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 CKBP12277 381 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms