RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 IGF2BP3O00425 579 aaKnown RBP eCLIP21.02■□□□□ 0.96
VRK2-205ENST00000432057 ASAP2O43150 1006 aa21.02■□□□□ 0.96
VRK2-205ENST00000432057 ADCY6O43306 1168 aa21.02■□□□□ 0.96
VRK2-205ENST00000432057 ERLIN1O75477 346 aa21.02■□□□□ 0.96
VRK2-205ENST00000432057 CLSTN1O94985 981 aa21.02■□□□□ 0.96
VRK2-205ENST00000432057 TMEM132AQ24JP5 1023 aa21.02■□□□□ 0.96
VRK2-205ENST00000432057 ZNF568Q3ZCX4 644 aa21.02■□□□□ 0.96
VRK2-205ENST00000432057 DUSP28Q4G0W2 176 aa21.02■□□□□ 0.96
VRK2-205ENST00000432057 OR6J1Q8NGC5 347 aa21.02■□□□□ 0.96
VRK2-205ENST00000432057 FAM212AQ96EL1 285 aa21.02■□□□□ 0.96
VRK2-205ENST00000432057 ABHD16BQ9H3Z7 469 aa21.02■□□□□ 0.96
VRK2-205ENST00000432057 CPSF3Q9UKF6 684 aaKnown RBP21.02■□□□□ 0.96
VRK2-205ENST00000432057 UMODL1Q5DID0 1318 aa21.02■□□□□ 0.96
VRK2-205ENST00000432057 ATMINO43313 823 aaPredicted RBP21.01■□□□□ 0.95
VRK2-205ENST00000432057 PHACTR2O75167 634 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 TUBBP07437 444 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 MMP3P08254 477 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 GZMAP12544 262 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 BEND6Q5SZJ8 279 aaPredicted RBP21.01■□□□□ 0.95
VRK2-205ENST00000432057 WDR49Q8IV35 697 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 RHOT2Q8IXI1 618 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 PTPRHQ9HD43 1115 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 CES2O00748 559 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 ZMYND10O75800 440 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 ITGBL1O95965 494 aaPredicted RBP21.01■□□□□ 0.95
VRK2-205ENST00000432057 IQCF3P0C7M6 154 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 RNASE9P60153 205 aaKnown RBP21.01■□□□□ 0.95
VRK2-205ENST00000432057 NOP14P78316 857 aaKnown RBP21.01■□□□□ 0.95
VRK2-205ENST00000432057 GPC5P78333 572 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 CUL2Q13617 745 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 NCOA4Q13772 614 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 LRRC1Q9BTT6 524 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 MTMR12Q9C0I1 747 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 IFT122Q9HBG6 1241 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 CTTNBP2NLQ9P2B4 639 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 AMFRQ9UKV5 643 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 AKT3Q9Y243 479 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 NUB1Q9Y5A7 615 aa21.01■□□□□ 0.95
VRK2-205ENST00000432057 H3BRB1 525 aa21■□□□□ 0.95
VRK2-205ENST00000432057 MAGEB2O15479 319 aa21■□□□□ 0.95
VRK2-205ENST00000432057 PPFIA4O75335 1185 aa21■□□□□ 0.95
VRK2-205ENST00000432057 CLTAP09496 248 aa21■□□□□ 0.95
VRK2-205ENST00000432057 ACO1P21399 889 aaKnown RBP21■□□□□ 0.95
VRK2-205ENST00000432057 PHKA2P46019 1235 aa21■□□□□ 0.95
VRK2-205ENST00000432057 MRPS25P82663 173 aaKnown RBP21■□□□□ 0.95
VRK2-205ENST00000432057 GRM1Q13255 1194 aa21■□□□□ 0.95
VRK2-205ENST00000432057 THNSL1Q8IYQ7 743 aa21■□□□□ 0.95
VRK2-205ENST00000432057 CEP120Q8N960 986 aa21■□□□□ 0.95
VRK2-205ENST00000432057 HES6Q96HZ4 224 aa21■□□□□ 0.95
VRK2-205ENST00000432057 PBKQ96KB5 322 aa21■□□□□ 0.95
VRK2-205ENST00000432057 FUT8Q9BYC5 575 aa21■□□□□ 0.95
VRK2-205ENST00000432057 TUT1Q9H6E5 874 aaKnown RBP21■□□□□ 0.95
VRK2-205ENST00000432057 CITO14578 2027 aa21■□□□□ 0.95
VRK2-205ENST00000432057 A0A087WZ62 844 aa20.99■□□□□ 0.95
VRK2-205ENST00000432057 CSDE1O75534 798 aaKnown RBP20.99■□□□□ 0.95
VRK2-205ENST00000432057 VTNP04004 478 aa20.99■□□□□ 0.95
VRK2-205ENST00000432057 ZNF157P51786 506 aaPredicted RBP20.99■□□□□ 0.95
VRK2-205ENST00000432057 HADHBP55084 474 aaKnown RBP20.99■□□□□ 0.95
VRK2-205ENST00000432057 OSTNP61366 133 aa20.99■□□□□ 0.95
VRK2-205ENST00000432057 CCDC70Q6NSX1 233 aa20.99■□□□□ 0.95
VRK2-205ENST00000432057 MTHFD1LQ6UB35 978 aa20.99■□□□□ 0.95
VRK2-205ENST00000432057 HDAC7Q8WUI4 952 aa20.99■□□□□ 0.95
VRK2-205ENST00000432057 FDXACB1Q9BRP7 624 aaPredicted RBP20.99■□□□□ 0.95
VRK2-205ENST00000432057 NFKBIZQ9BYH8 718 aa20.99■□□□□ 0.95
VRK2-205ENST00000432057 CDT1Q9H211 546 aa20.99■□□□□ 0.95
VRK2-205ENST00000432057 CHORDC1Q9UHD1 332 aaPredicted RBP20.99■□□□□ 0.95
VRK2-205ENST00000432057 ATP8B1O43520 1251 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 CEP104O60308 925 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 HOXD8P13378 290 aaPredicted RBP20.98■□□□□ 0.95
VRK2-205ENST00000432057 CLEC16AQ2KHT3 1053 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 KRT222Q8N1A0 295 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 USP38Q8NB14 1042 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 PRMT7Q9NVM4 692 aaPredicted RBP20.98■□□□□ 0.95
VRK2-205ENST00000432057 HOXC6P09630 235 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 MCM3P25205 808 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 AP3M2P53677 418 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 PPFIA1Q13136 1202 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 TCEAL1Q15170 157 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 TAF1CQ15572 869 aaPredicted RBP20.98■□□□□ 0.95
VRK2-205ENST00000432057 GRIK4Q16099 956 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 MORN1Q5T089 497 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 IQSEC1Q6DN90 963 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 ZNF653Q96CK0 615 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 DMGDHQ9UI17 866 aaKnown RBP20.98■□□□□ 0.95
VRK2-205ENST00000432057 TNFSF13BQ9Y275 285 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 PCDHB4Q9Y5E5 795 aa20.98■□□□□ 0.95
VRK2-205ENST00000432057 TRIP11Q15643 1979 aa20.97■□□□□ 0.95
VRK2-205ENST00000432057 CST3P01034 146 aaPredicted RBP20.97■□□□□ 0.95
VRK2-205ENST00000432057 PLA2G4AP47712 749 aa20.97■□□□□ 0.95
VRK2-205ENST00000432057 MAP2K5Q13163 448 aa20.97■□□□□ 0.95
VRK2-205ENST00000432057 SURF1Q15526 300 aa20.97■□□□□ 0.95
VRK2-205ENST00000432057 AMHR2Q16671 573 aa20.97■□□□□ 0.95
VRK2-205ENST00000432057 PRAMEF19Q5SWL8 479 aa20.97■□□□□ 0.95
VRK2-205ENST00000432057 C8orf74Q6P047 294 aa20.97■□□□□ 0.95
VRK2-205ENST00000432057 EFCAB13Q8IY85 973 aa20.97■□□□□ 0.95
VRK2-205ENST00000432057 TMEM192Q8IY95 271 aa20.97■□□□□ 0.95
VRK2-205ENST00000432057 GSPT2Q8IYD1 628 aaKnown RBP20.97■□□□□ 0.95
VRK2-205ENST00000432057 HINFPQ9BQA5 517 aa20.97■□□□□ 0.95
VRK2-205ENST00000432057 SELENOOQ9BVL4 669 aa20.97■□□□□ 0.95
VRK2-205ENST00000432057 SLC5A4Q9NY91 659 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms