RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 KIRREL3Q8IZU9 778 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 SYNE4Q8N205 404 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 TMEM47Q9BQJ4 181 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 LXNQ9BS40 222 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 ATF5Q9Y2D1 282 aaPredicted RBP12.03□□□□□ -0.48
SEC16A-206ENST00000431893 ANO9A1A5B4 782 aa12.02□□□□□ -0.48
SEC16A-206ENST00000431893 DPYSL4O14531 572 aa12.02□□□□□ -0.48
SEC16A-206ENST00000431893 SEC24CP53992 1094 aa12.02□□□□□ -0.48
SEC16A-206ENST00000431893 SMTNL2Q2TAL5 461 aa12.02□□□□□ -0.48
SEC16A-206ENST00000431893 SLC30A9Q6PML9 568 aa12.02□□□□□ -0.48
SEC16A-206ENST00000431893 MCEEQ96PE7 176 aa12.02□□□□□ -0.48
SEC16A-206ENST00000431893 MRPL1Q9BYD6 325 aaKnown RBP12.02□□□□□ -0.48
SEC16A-206ENST00000431893 ZBTB5O15062 677 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 PARNO95453 639 aaKnown RBP12.02□□□□□ -0.49
SEC16A-206ENST00000431893 AKR1B1P15121 316 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 GUCY1A2P33402 732 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 PNMA8BQ9ULN7 279 aaPredicted RBP12.02□□□□□ -0.49
SEC16A-206ENST00000431893 SATB2Q9UPW6 733 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 PZPP20742 1482 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 FAM187AA6NFU0 413 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 CPB1P15086 417 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 OVGP1Q12889 678 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 STX3Q13277 289 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 MAPRE2Q15555 327 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 SHC4Q6S5L8 630 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 CAAP1Q9H8G2 361 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 LY9Q9HBG7 655 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 SH3GLB2Q9NR46 395 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 PHKA2P46019 1235 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 USP10Q14694 798 aaKnown RBP12.02□□□□□ -0.49
SEC16A-206ENST00000431893 ADGRF4Q8IZF3 695 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 ZC3H15Q8WU90 426 aaKnown RBP12.02□□□□□ -0.49
SEC16A-206ENST00000431893 OSBPL10Q9BXB5 764 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 GOLPH3Q9H4A6 298 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 CD274Q9NZQ7 290 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 CDYLQ9Y232 598 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 MAP3K10Q02779 954 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 KLC1Q07866 573 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 EIF2AK1Q9BQI3 630 aaKnown RBP12.02□□□□□ -0.49
SEC16A-206ENST00000431893 APOL5Q9BWW9 433 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 PLEKHA5Q9HAU0 1116 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 BFARQ9NZS9 450 aa12.02□□□□□ -0.49
SEC16A-206ENST00000431893 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.01□□□□□ -0.49
SEC16A-206ENST00000431893 TPST1O60507 370 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 KRT7P08729 469 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 SCP2P22307 547 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 ABCD1P33897 745 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 TPI1P60174 286 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 ITPRIPL1Q6GPH6 555 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 DIS3LQ8TF46 1054 aaKnown RBP12.01□□□□□ -0.49
SEC16A-206ENST00000431893 DNAJC9Q8WXX5 260 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 STAMBPL1Q96FJ0 436 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 CEP95Q96GE4 821 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 ZNF556Q9HAH1 456 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 GPR108Q9NPR9 543 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 RBM12Q9NTZ6 932 aaKnown RBP12.01□□□□□ -0.49
SEC16A-206ENST00000431893 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.01□□□□□ -0.49
SEC16A-206ENST00000431893 USP15Q9Y4E8 981 aaPredicted RBP12.01□□□□□ -0.49
SEC16A-206ENST00000431893 ARHGEF12Q9NZN5 1544 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 TARSL2A2RTX5 802 aaKnown RBP12.01□□□□□ -0.49
SEC16A-206ENST00000431893 EIF3HO15372 352 aaKnown RBP eCLIP12.01□□□□□ -0.499e-8■■■■□ 25
SEC16A-206ENST00000431893 ETFBP38117 255 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 C1orf131Q8NDD1 294 aaKnown RBP12.01□□□□□ -0.49
SEC16A-206ENST00000431893 PITPNM2Q9BZ72 1349 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 B2RBV5 119 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 PRDX5P30044 214 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 BAG6P46379 1132 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 TNFAIP2Q03169 654 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 PTK7Q13308 1070 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 ARHGAP17Q68EM7 881 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 TTC23LQ6PF05 361 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 CCDC60Q8IWA6 550 aaPredicted RBP12.01□□□□□ -0.49
SEC16A-206ENST00000431893 TDRD3Q9H7E2 651 aaKnown RBP12.01□□□□□ -0.49
SEC16A-206ENST00000431893 CTTNBP2Q8WZ74 1663 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 PPP1R37O75864 691 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 SUPT20HL1Q3ZLR7 823 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 BTBD8Q5XKL5 378 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 SLC40A1Q9NP59 571 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 C6orf203Q9P0P8 240 aaPredicted RBP12.01□□□□□ -0.49
SEC16A-206ENST00000431893 MYL2P10916 166 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 CLK1P49759 484 aaKnown RBP12.01□□□□□ -0.49
SEC16A-206ENST00000431893 FAM160B2Q86V87 743 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 GPD1LQ8N335 351 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 RAB6BQ9NRW1 208 aa12.01□□□□□ -0.49
SEC16A-206ENST00000431893 PAIP2BQ9ULR5 123 aaKnown RBP12.01□□□□□ -0.49
SEC16A-206ENST00000431893 CHI3L2Q15782 390 aa12□□□□□ -0.49
SEC16A-206ENST00000431893 PROM2Q8N271 834 aa12□□□□□ -0.49
SEC16A-206ENST00000431893 CATSPER1Q8NEC5 780 aa12□□□□□ -0.49
SEC16A-206ENST00000431893 OTUB1Q96FW1 271 aaPredicted RBP12□□□□□ -0.49
SEC16A-206ENST00000431893 STRBPQ96SI9 672 aaKnown RBP12□□□□□ -0.49
SEC16A-206ENST00000431893 GEMIN8Q9NWZ8 242 aaKnown RBP12□□□□□ -0.49
SEC16A-206ENST00000431893 ARHGEF38Q9NXL2 777 aa12□□□□□ -0.49
SEC16A-206ENST00000431893 SELENONQ9NZV5 590 aa12□□□□□ -0.49
SEC16A-206ENST00000431893 NUP153P49790 1475 aaKnown RBP12□□□□□ -0.49
SEC16A-206ENST00000431893 DYTNA2CJ06 578 aa12□□□□□ -0.49
SEC16A-206ENST00000431893 KIF1CO43896 1103 aaKnown RBP12□□□□□ -0.49
SEC16A-206ENST00000431893 CYP2E1P05181 493 aaPredicted RBP12□□□□□ -0.49
SEC16A-206ENST00000431893 PLA2G4AP47712 749 aa12□□□□□ -0.49
SEC16A-206ENST00000431893 FMR1Q06787 632 aaKnown RBP eCLIP12□□□□□ -0.491e-6■■■□□ 17.7
SEC16A-206ENST00000431893 HLFQ16534 295 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms