RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 INHBCP55103 352 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 CASP9P55211 416 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 SURF1Q15526 300 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 INSCQ1MX18 579 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 KANK2Q63ZY3 851 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 FOXR2Q6PJQ5 311 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 ZNF619Q8N2I2 560 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 TTC29Q8NA56 475 aaPredicted RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 FBXO22Q8NEZ5 403 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 OR8K3Q8NH51 312 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 FNIP1Q8TF40 1166 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 CCDC12Q8WUD4 166 aaPredicted RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 SYN2Q92777 582 aaPredicted RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 PPP2R3CQ969Q6 453 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 TRMT2BQ96GJ1 504 aaKnown RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 SAV1Q9H4B6 383 aaPredicted RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 GID8Q9NWU2 228 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 STAG3Q9UJ98 1225 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 NOC2LQ9Y3T9 749 aaKnown RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 L3MBTL1Q9Y468 752 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 WDR97A6NE52 1622 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 FAM47DPA6NHR8 397 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 MCF2LO15068 1137 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 FOXP2O15409 715 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 KRT8P05787 483 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 KELP23276 732 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 PTPN9P43378 593 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 NKX2-5P52952 324 aaPredicted RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 HADHBP55084 474 aaKnown RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 MZT2BQ6NZ67 158 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 CASC4Q6P4E1 433 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 FAM186BQ8IYM0 893 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 ZNF579Q8NAF0 562 aaKnown RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 MRPS27Q92552 414 aaKnown RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 ANKS1AQ92625 1134 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 VPS35Q96QK1 796 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 OLFM1Q99784 485 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 SHCBP1LQ9BZQ2 653 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 IFT22Q9H7X7 185 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 MRM3Q9HC36 420 aaKnown RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 NOP53Q9NZM5 478 aaKnown RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 AASSQ9UDR5 926 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 PCDHB6Q9Y5E3 794 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 KIF7Q2M1P5 1343 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 IQANK1A0A1B0GTG1 560 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 E7EVH7 732 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 SNRPA1P09661 255 aaKnown RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 WEE2P0C1S8 567 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 CHRNB1P11230 501 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 TAP1Q03518 808 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 NNTQ13423 1086 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 MTMR1Q13613 665 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 KYAT1Q16773 422 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 PLEKHA7Q6IQ23 1121 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 HMBOX1Q6NT76 420 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 RNF207Q6ZRF8 634 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 R3HCC1LQ7Z5L2 792 aaKnown RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 NME9Q86XW9 330 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 FAM178BQ8IXR5 827 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 EFHBQ8N7U6 833 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 ANKRD53Q8N9V6 530 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 MIGA1Q8NAN2 632 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 FBXO41Q8TF61 875 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 EMILIN2Q9BXX0 1053 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 ZFYVE28Q9HCC9 887 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 SCOCQ9UIL1 159 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 DOLKQ9UPQ8 538 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 CDK2AP1O14519 115 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ST8SIA5O15466 376 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 N4BP1O75113 896 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 CYP2A6P11509 494 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 PORP16435 677 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 EIF4A3P38919 411 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ARHGDIAP52565 204 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 GTF2A2P52657 109 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 YBEYP58557 167 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 RAB14P61106 215 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 CTAG1AP78358 180 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 C17orf67Q0P5P2 114 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 AP3B2Q13367 1082 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 TDGQ13569 410 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 TRIP13Q15645 432 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 KLHL38Q2WGJ6 581 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ZNF658Q5TYW1 1059 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 RALYLQ86SE5 291 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 NRSN1Q8IZ57 195 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 STKLD1Q8NE28 680 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 MED30Q96HR3 178 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ADAD1Q96M93 576 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 BCL7BQ9BQE9 202 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 CLK4Q9HAZ1 481 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 SARS2Q9NP81 518 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 INTS9Q9NV88 658 aaKnown RBP5.66□□□□□ -1.5
PTPN4-203ENST00000430976 HESX1Q9UBX0 185 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 L1RE1Q9UN81 338 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 RNF24Q9Y225 148 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 SIK3Q9Y2K2 1263 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 ZHX2Q9Y6X8 837 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 TRAV20A0A0B4J274 112 aa5.66□□□□□ -1.5
PTPN4-203ENST00000430976 OR6C65A6NJZ3 312 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms