RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 FAM9AQ8IZU1 332 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P9-201ENST00000429856 SAMD3Q8N6K7 520 aa3.78□□□□□ -1.8
HMGB1P9-201ENST00000429856 MDGA1Q8NFP4 955 aa3.78□□□□□ -1.8
HMGB1P9-201ENST00000429856 OR7D4Q8NG98 312 aa3.78□□□□□ -1.8
HMGB1P9-201ENST00000429856 BCO1Q9HAY6 547 aa3.78□□□□□ -1.8
HMGB1P9-201ENST00000429856 SAP30BPQ9UHR5 308 aaKnown RBP3.78□□□□□ -1.8
HMGB1P9-201ENST00000429856 TAGLN3Q9UI15 199 aa3.78□□□□□ -1.8
HMGB1P9-201ENST00000429856 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 B5MCH6 92 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 HOXA3O43365 443 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 SNUPNO95149 360 aaKnown RBP3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 PEX11BO96011 259 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 TRIM27P14373 513 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 PAX3P23760 479 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 MCAMP43121 646 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 MAN2A2P49641 1150 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 FLT3LGP49771 235 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 SLC16A1P53985 500 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 MGAT2Q10469 447 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 ACAP2Q15057 778 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 LAIR1Q6GTX8 287 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 PCSK4Q6UW60 755 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 PNMA8AQ86V59 439 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 SPICE1Q8N0Z3 855 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 ST8SIA2Q92186 375 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 RUNDC1Q96C34 613 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 SARGQ9BW04 601 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 ZNF700Q9H0M5 742 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 PTPRHQ9HD43 1115 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 TRPS1Q9UHF7 1281 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 HDAC5Q9UQL6 1122 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 FAM50BQ9Y247 325 aa3.77□□□□□ -1.81
HMGB1P9-201ENST00000429856 PRR5-ARHGAP8B1AHC4 643 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 XPOTO43592 962 aaKnown RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 CT47B1P0C2W7 299 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 GSPT1P15170 499 aaKnown RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 CCND1P24385 295 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 ADSLP30566 484 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 RECQLP46063 649 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 PER3P56645 1201 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 SP140Q13342 867 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 HDAC1Q13547 482 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 CNGB1Q14028 1251 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 GBX1Q14549 363 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 DHX8Q14562 1220 aaKnown RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 ZNF267Q14586 743 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 BRD3Q15059 726 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 FAM47AQ5JRC9 791 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 EFCAB2Q5VUJ9 269 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 SPTY2D1Q68D10 685 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 NAIF1Q69YI7 327 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 B3GNT9Q6UX72 402 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 HTR3DQ70Z44 454 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 C11orf96Q7Z7L8 435 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 ELOA2Q8IYF1 753 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 LILRA3Q8N6C8 439 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 MB21D1Q8N884 522 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 ATXN2LQ8WWM7 1075 aaKnown RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 JADE3Q92613 823 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 CYFIP2Q96F07 1278 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 TEKT5Q96M29 485 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 UHRF1Q96T88 793 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 CPPED1Q9BRF8 314 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 MANSC1Q9H8J5 431 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 SLC2A4RGQ9NR83 387 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 LANCL2Q9NS86 450 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 INTUQ9ULD6 942 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 DNM3Q9UQ16 869 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 ANKRD6Q9Y2G4 727 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 DAAM1Q9Y4D1 1078 aa3.76□□□□□ -1.81
HMGB1P9-201ENST00000429856 GOLGA6CA6NDK9 693 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 GOLGA6BA6NDN3 693 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 IFRD1O00458 451 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 TEX33O43247 280 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 NDUFS2O75306 463 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 STC2O76061 302 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 RHOBTB3O94955 611 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 GOLGA6DP0CG33 693 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 IL2RBP14784 551 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 MGAT1P26572 445 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 PTPN7P35236 360 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 SREBF1P36956 1147 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 WASP42768 502 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 PPP3CAQ08209 521 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 HLTFQ14527 1009 aaKnown RBP eCLIP3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 NOMO1Q15155 1222 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 FAM214AQ32MH5 1076 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 PRAMEF14Q5SWL7 426 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 MIGA2Q7L4E1 593 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 ZNF572Q7Z3I7 529 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 TMPRSS6Q8IU80 811 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 TRMT2AQ8IZ69 625 aaKnown RBP3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 PQLC1Q8N2U9 271 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 PJA1Q8NG27 643 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 MDM1Q8TC05 714 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 CASKIN2Q8WXE0 1202 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 HOXB13Q92826 284 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 HSPBAP1Q96EW2 488 aa3.75□□□□□ -1.81
HMGB1P9-201ENST00000429856 C7orf25Q9BPX7 421 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms