RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 CNOT8Q9UFF9 292 aaKnown RBP17.4■□□□□ 0.38
MBD4-203ENST00000429544 BHMG1C9JSJ3 638 aaPredicted RBP17.39■□□□□ 0.37
MBD4-203ENST00000429544 GJA5P36382 358 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 LAMTOR4Q0VGL1 99 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 CUL1Q13616 776 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 TMEM63BQ5T3F8 832 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 GOLGA6L1Q8N7Z2 621 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 ATP8B4Q8TF62 1192 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 ZIM3Q96PE6 472 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 ERVK-5Q9HDB9 667 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 UVRAGQ9P2Y5 699 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 ZBTB42B2RXF5 422 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 CLDN3O15551 220 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 SPOPO43791 374 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 ECHS1P30084 290 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 TNFSF9P41273 254 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 EFNA5P52803 228 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 CUL2Q13617 745 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 PLCB4Q15147 1175 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 DPY19L2Q6NUT2 758 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 ARMC9Q7Z3E5 817 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 MAATS1Q7Z4T9 603 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 TRAPPC12Q8WVT3 735 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 SYT17Q9BSW7 474 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 CCDC113Q9H0I3 377 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 PPME1Q9Y570 386 aa17.39■□□□□ 0.37
MBD4-203ENST00000429544 UMODL1Q5DID0 1318 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 GOLGA6L10A0A0M3HER8 536 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 MSCO60682 206 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 PTENP60484 403 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 EAPPQ56P03 285 aaPredicted RBP17.38■□□□□ 0.37
MBD4-203ENST00000429544 ZPBP2Q6X784 338 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 MREGQ8N565 214 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 RNF149Q8NC42 400 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 TCP11Q8WWU5 503 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 SH3GL2Q99962 352 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 TCHPQ9BT92 498 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 MRPL4Q9BYD3 311 aaKnown RBP17.38■□□□□ 0.37
MBD4-203ENST00000429544 WNT8AQ9H1J5 351 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 PCDHB4Q9Y5E5 795 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 PCDHB2Q9Y5E7 798 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 PRKCBP05771 671 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 ACO1P21399 889 aaKnown RBP17.38■□□□□ 0.37
MBD4-203ENST00000429544 NOP14P78316 857 aaKnown RBP17.38■□□□□ 0.37
MBD4-203ENST00000429544 CFAP58Q5T655 872 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 CDCA2Q69YH5 1023 aaPredicted RBP17.38■□□□□ 0.37
MBD4-203ENST00000429544 CCDC62Q6P9F0 684 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 BRSK2Q8IWQ3 736 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 MORC4Q8TE76 937 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 ZC3H15Q8WU90 426 aaKnown RBP17.38■□□□□ 0.37
MBD4-203ENST00000429544 CPA5Q8WXQ8 436 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 CD101Q93033 1021 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 L3MBTL3Q96JM7 780 aaPredicted RBP17.38■□□□□ 0.37
MBD4-203ENST00000429544 ZNF668Q96K58 619 aaPredicted RBP17.38■□□□□ 0.37
MBD4-203ENST00000429544 TRIM51Q9BSJ1 452 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 NEUROG2Q9H2A3 272 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 MROH8Q9H579 483 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 PDGFCQ9NRA1 345 aa17.38■□□□□ 0.37
MBD4-203ENST00000429544 DAPK3O43293 454 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 OPA1O60313 960 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 CLTAP09496 248 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 UNGP13051 313 aaPredicted RBP17.37■□□□□ 0.37
MBD4-203ENST00000429544 PEX5P50542 639 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 BPIFB4P59827 614 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 POU5F1Q01860 360 aaKnown RBP17.37■□□□□ 0.37
MBD4-203ENST00000429544 SEL1L2Q5TEA6 688 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 SCARA3Q6AZY7 606 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 PLPPR4Q7Z2D5 763 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 ZBTB8OSQ8IWT0 167 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 DPH5Q9H2P9 285 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 NUB1Q9Y5A7 615 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 EVPLQ92817 2033 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 TOM1L1O75674 476 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 TXNP10599 105 aaKnown RBP17.37■□□□□ 0.37
MBD4-203ENST00000429544 CYP2C8P10632 490 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 MXD4Q14582 209 aaPredicted RBP17.37■□□□□ 0.37
MBD4-203ENST00000429544 PHLDB2Q86SQ0 1253 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 ZNF677Q86XU0 584 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 RHPN2Q8IUC4 686 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 MCOLN2Q8IZK6 566 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 EIF1ADQ8N9N8 165 aaKnown RBP17.37■□□□□ 0.37
MBD4-203ENST00000429544 FAM212AQ96EL1 285 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 ACO2Q99798 780 aaKnown RBP17.37■□□□□ 0.37
MBD4-203ENST00000429544 EFCC1Q9HA90 598 aa17.37■□□□□ 0.37
MBD4-203ENST00000429544 PLXNA1Q9UIW2 1896 aa17.36■□□□□ 0.37
MBD4-203ENST00000429544 GOLGA6CA6NDK9 693 aa17.36■□□□□ 0.37
MBD4-203ENST00000429544 GOLGA8KD6RF30 607 aa17.36■□□□□ 0.37
MBD4-203ENST00000429544 GAS2O43903 313 aaKnown RBP17.36■□□□□ 0.37
MBD4-203ENST00000429544 FAM189A1O60320 539 aa17.36■□□□□ 0.37
MBD4-203ENST00000429544 GJB1P08034 283 aa17.36■□□□□ 0.37
MBD4-203ENST00000429544 GOLGA6DP0CG33 693 aa17.36■□□□□ 0.37
MBD4-203ENST00000429544 SSTR3P32745 418 aaPredicted RBP17.36■□□□□ 0.37
MBD4-203ENST00000429544 NCOA4Q13772 614 aa17.36■□□□□ 0.37
MBD4-203ENST00000429544 CLUL1Q15846 466 aa17.36■□□□□ 0.37
MBD4-203ENST00000429544 TMEM270Q6UE05 265 aa17.36■□□□□ 0.37
MBD4-203ENST00000429544 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.36■□□□□ 0.37
MBD4-203ENST00000429544 PIK3R5Q8WYR1 880 aa17.36■□□□□ 0.37
MBD4-203ENST00000429544 ZBTB10Q96DT7 871 aa17.36■□□□□ 0.37
MBD4-203ENST00000429544 GOLGA6AQ9NYA3 693 aa17.36■□□□□ 0.37
MBD4-203ENST00000429544 UTP11Q9Y3A2 253 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms