RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 TMEM175Q9BSA9 504 aa15.81■□□□□ 0.12
SGCE-204ENST00000428696 KIAA1586Q9HCI6 787 aa15.81■□□□□ 0.12
SGCE-204ENST00000428696 PDE11AQ9HCR9 933 aa15.81■□□□□ 0.12
SGCE-204ENST00000428696 CNTN3Q9P232 1028 aa15.81■□□□□ 0.12
SGCE-204ENST00000428696 FRMD4BQ9Y2L6 1034 aa15.81■□□□□ 0.12
SGCE-204ENST00000428696 F8W810 466 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 KIAA0391O15091 583 aaKnown RBP15.8■□□□□ 0.12
SGCE-204ENST00000428696 INPPL1O15357 1258 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 B3GAT3O94766 335 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 IL18RAPO95256 599 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 KCNE1P15382 129 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 RPL13P26373 211 aaKnown RBP15.8■□□□□ 0.12
SGCE-204ENST00000428696 CLCNKBP51801 687 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 GUCY2FP51841 1108 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 ADAM9Q13443 819 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 MORC3Q14149 939 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 TMEM132DQ14C87 1099 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 SNRNP35Q16560 246 aaKnown RBP15.8■□□□□ 0.12
SGCE-204ENST00000428696 PTPROQ16827 1216 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 TMC7Q7Z402 723 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 TMEM173Q86WV6 379 aaPredicted RBP15.8■□□□□ 0.12
SGCE-204ENST00000428696 CD302Q8IX05 232 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 SLC39A11Q8N1S5 342 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 TMEM130Q8N3G9 435 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 SPPL3Q8TCT6 385 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 GUCD1Q96NT3 240 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 FNBP1Q96RU3 617 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 TUBGCP4Q9UGJ1 667 aa15.8■□□□□ 0.12
SGCE-204ENST00000428696 C5orf67F2Z3F1 127 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 XPOTO43592 962 aaKnown RBP15.79■□□□□ 0.12
SGCE-204ENST00000428696 NFICP08651 508 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 DLATP10515 647 aaKnown RBP15.79■□□□□ 0.12
SGCE-204ENST00000428696 CD44P16070 742 aaKnown RBP15.79■□□□□ 0.12
SGCE-204ENST00000428696 NR2F2P24468 414 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 STX17P56962 302 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 SOX4Q06945 474 aaPredicted RBP15.79■□□□□ 0.12
SGCE-204ENST00000428696 DSC1Q08554 894 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 HSP90AA2PQ14568 343 aaPredicted RBP15.79■□□□□ 0.12
SGCE-204ENST00000428696 XKR4Q5GH76 650 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 ANKRD40Q6AI12 368 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 CAVIN1Q6NZI2 390 aaKnown RBP15.79■□□□□ 0.12
SGCE-204ENST00000428696 ADSSL1Q8N142 457 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 BEST2Q8NFU1 509 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 BCL7CQ8WUZ0 217 aaPredicted RBP15.79■□□□□ 0.12
SGCE-204ENST00000428696 NELFBQ8WX92 580 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 P2RX5Q93086 422 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 IGSF21Q96ID5 467 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 ENTPD7Q9NQZ7 604 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 CTNND2Q9UQB3 1225 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 R3HCC1Q9Y3T6 440 aaKnown RBP15.79■□□□□ 0.12
SGCE-204ENST00000428696 NUB1Q9Y5A7 615 aa15.79■□□□□ 0.12
SGCE-204ENST00000428696 C2CD2LO14523 706 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 LPXNO60711 386 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 CLSTN1O94985 981 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 TNNI1P19237 187 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 BMP6P22004 513 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 DNAJB1P25685 340 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 ADGRE1Q14246 886 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 BMS1Q14692 1282 aaKnown RBP15.78■□□□□ 0.12
SGCE-204ENST00000428696 CCDC183Q5T5S1 534 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 LMBRD2Q68DH5 695 aaPredicted RBP15.78■□□□□ 0.12
SGCE-204ENST00000428696 KIAA1841Q6NSI8 718 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 DCLRE1AQ6PJP8 1040 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 SASS6Q6UVJ0 657 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 CEP57Q86XR8 500 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 BRSK2Q8IWQ3 736 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 VPS52Q8N1B4 723 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 CACTINQ8WUQ7 758 aaKnown RBP15.78■□□□□ 0.12
SGCE-204ENST00000428696 DDX27Q96GQ7 796 aaKnown RBP15.78■□□□□ 0.12
SGCE-204ENST00000428696 DHTKD1Q96HY7 919 aaPredicted RBP15.78■□□□□ 0.12
SGCE-204ENST00000428696 POP1Q99575 1024 aaKnown RBP15.78■□□□□ 0.12
SGCE-204ENST00000428696 ASB7Q9H672 318 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 UBQLN1Q9UMX0 589 aaKnown RBP15.78■□□□□ 0.12
SGCE-204ENST00000428696 TRAF3IP3Q9Y228 551 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 FNDC1Q4ZHG4 1894 aaPredicted RBP15.78■□□□□ 0.12
SGCE-204ENST00000428696 COL4A6Q14031 1691 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 MYO9BQ13459 2157 aa15.78■□□□□ 0.12
SGCE-204ENST00000428696 CARNS1A5YM72 827 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 TRIM49BA6NDI0 452 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 PPP1R3GB7ZBB8 358 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 PODXLO00592 558 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 CETN3O15182 167 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 KIF4AO95239 1232 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 CXCL14O95715 111 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 KRT19P08727 400 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 PPP1R2P41236 205 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 CASP4P49662 377 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 ERVFC1P60507 584 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 SKIV2LQ15477 1246 aaKnown RBP15.77■□□□□ 0.12
SGCE-204ENST00000428696 PLPP4Q5VZY2 271 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 EP400NLQ6ZTU2 488 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 RBM23Q86U06 439 aaKnown RBP15.77■□□□□ 0.12
SGCE-204ENST00000428696 CREBRFQ8IUR6 639 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 C12orf56Q8IXR9 622 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 TRIML1Q8N9V2 468 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 FAM84AQ96KN4 292 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 UROC1Q96N76 676 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 TCF25Q9BQ70 676 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 TLR9Q9NR96 1032 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 DPP3Q9NY33 737 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms