RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 TXNRD2Q9NNW7 524 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 RNF181Q9P0P0 153 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 USTQ9Y2C2 406 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 RLFQ13129 1914 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 O00370 1275 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 SCP2P22307 547 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 PEX5P50542 639 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 POU5F1Q01860 360 aaKnown RBP12.38□□□□□ -0.43
UBR4-207ENST00000425413 TMEM132AQ24JP5 1023 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 CLEC16AQ2KHT3 1053 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 UBAP2Q5T6F2 1119 aaKnown RBP12.38□□□□□ -0.43
UBR4-207ENST00000425413 CCDC105Q8IYK2 499 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 ATG4AQ8WYN0 398 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 HEMGNQ9BXL5 484 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 ASCC2Q9H1I8 757 aaPredicted RBP12.38□□□□□ -0.43
UBR4-207ENST00000425413 GTF3C4Q9UKN8 822 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 CENPFP49454 3210 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 GOLGA6L10A6NI86 522 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 TULP2O00295 520 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 NOP56O00567 594 aaKnown RBP12.38□□□□□ -0.43
UBR4-207ENST00000425413 TRIP13Q15645 432 aaPredicted RBP12.38□□□□□ -0.43
UBR4-207ENST00000425413 Q3C1V9 767 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 ZACNQ401N2 412 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 GJC2Q5T442 439 aaPredicted RBP12.38□□□□□ -0.43
UBR4-207ENST00000425413 SCARA5Q6ZMJ2 495 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 FBXO16Q8IX29 292 aaPredicted RBP12.38□□□□□ -0.43
UBR4-207ENST00000425413 RNF149Q8NC42 400 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 DNERQ8NFT8 737 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 FBXO25Q8TCJ0 367 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 TMEM174Q8WUU8 243 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 VTI1AQ96AJ9 217 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 NAP1L3Q99457 506 aaPredicted RBP12.38□□□□□ -0.43
UBR4-207ENST00000425413 FEZ2Q9UHY8 353 aaPredicted RBP12.38□□□□□ -0.43
UBR4-207ENST00000425413 NUB1Q9Y5A7 615 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 ATP8B3O60423 1300 aa12.38□□□□□ -0.43
UBR4-207ENST00000425413 MIF4GDA9UHW6 222 aaKnown RBP12.37□□□□□ -0.43
UBR4-207ENST00000425413 STAM2O75886 525 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 C4BPAP04003 597 aaKnown RBP12.37□□□□□ -0.43
UBR4-207ENST00000425413 CYP1A2P05177 515 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 ARL2P36404 184 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 CCT5P48643 541 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 IGBP1P78318 339 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 PSMD6Q15008 389 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 ODF2Q5BJF6 829 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 NOL9Q5SY16 702 aaKnown RBP12.37□□□□□ -0.43
UBR4-207ENST00000425413 CCDC137Q6PK04 289 aaKnown RBP12.37□□□□□ -0.43
UBR4-207ENST00000425413 SRLQ86TD4 932 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 CCDC25Q86WR0 208 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 BCAS4Q8TDM0 211 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 LRRC45Q96CN5 670 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 NLRP4Q96MN2 994 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 FMO2Q99518 471 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 ERP44Q9BS26 406 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 AZI2Q9H6S1 392 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 NRBP2Q9NSY0 501 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 MYZAPP0CAP1 466 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 RARAP10276 462 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 NR1D1P20393 614 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 NAMPTP43490 491 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 NSFP46459 744 aaKnown RBP12.37□□□□□ -0.43
UBR4-207ENST00000425413 VPS41P49754 854 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 GCNT1Q02742 428 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 IFFO1Q0D2I5 559 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 TMC3Q7Z5M5 1100 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 RIOX2Q8IUF8 465 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 THNSL1Q8IYQ7 743 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 MREGQ8N565 214 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 DNAJC17Q9NVM6 304 aaKnown RBP12.37□□□□□ -0.43
UBR4-207ENST00000425413 KLHL11Q9NVR0 708 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 LOXHD1Q8IVV2 1947 aa12.37□□□□□ -0.43
UBR4-207ENST00000425413 TLDC2A0PJX2 215 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 DCDC2CA8MYV0 355 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 PMM2O15305 246 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 THAP12O43422 761 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 CST3P01034 146 aaPredicted RBP12.36□□□□□ -0.43
UBR4-207ENST00000425413 GTF2H1P32780 548 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 RTP1P59025 263 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 NOP14P78316 857 aaKnown RBP12.36□□□□□ -0.43
UBR4-207ENST00000425413 ZNF844Q08AG5 666 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 MKRN3Q13064 507 aaKnown RBP12.36□□□□□ -0.43
UBR4-207ENST00000425413 SH3D19Q5HYK7 790 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 ZFYVE27Q5T4F4 411 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 RHPN2Q8IUC4 686 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 MCOLN2Q8IZK6 566 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 ATP6V1G3Q96LB4 118 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 MTMR12Q9C0I1 747 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 RAB17Q9H0T7 212 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 TTC7AQ9ULT0 858 aaPredicted RBP12.36□□□□□ -0.43
UBR4-207ENST00000425413 MYO1FO00160 1098 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 ATG7O95352 703 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 GNA15P30679 374 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 RPL21P46778 160 aaKnown RBP12.36□□□□□ -0.43
UBR4-207ENST00000425413 RWDD2BP57060 319 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 CUL2Q13617 745 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 NCOA4Q13772 614 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 KRT71Q3SY84 523 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 C15orf39Q6ZRI6 1047 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 MMS22LQ6ZRQ5 1243 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 CCDC50Q8IVM0 306 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 CEP120Q8N960 986 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms