RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 DDX19AQ9NUU7 478 aaKnown RBP14.26□□□□□ -0.13
VRK3-203ENST00000424804 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.26□□□□□ -0.13
VRK3-203ENST00000424804 GDAQ9Y2T3 454 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 EP300Q09472 2414 aaPredicted RBP14.25□□□□□ -0.13
VRK3-203ENST00000424804 SMIM28A0A1B0GU29 152 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 LIG1P18858 919 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 PROZP22891 400 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 NPTX2P47972 431 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 CLCNKBP51801 687 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 ATP2C1P98194 919 aaPredicted RBP14.25□□□□□ -0.13
VRK3-203ENST00000424804 CREMQ03060 361 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 CEBPZQ03701 1054 aaKnown RBP14.25□□□□□ -0.13
VRK3-203ENST00000424804 UPP1Q16831 310 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 GLRA4Q5JXX5 417 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 ATF7IP2Q5U623 682 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 FAM173BQ6P4H8 233 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 C1orf186Q6ZWK4 172 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 CEP57Q86XR8 500 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 ITFG1Q8TB96 612 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 GPR152Q8TDT2 470 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 KIFAP3Q92845 792 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 FGF14Q92915 247 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 ZMAT2Q96NC0 199 aaKnown RBP14.25□□□□□ -0.13
VRK3-203ENST00000424804 PLIN2Q99541 437 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 RTP3Q9BQQ7 232 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 CDT1Q9H211 546 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 GOLGA2P5Q9HBQ8 144 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 SLC2A4RGQ9NR83 387 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 ARHGAP28Q9P2N2 729 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 MTRRQ9UBK8 725 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 TNFSF13BQ9Y275 285 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 CITO14578 2027 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 FANCMQ8IYD8 2048 aa14.25□□□□□ -0.13
VRK3-203ENST00000424804 TBC1D4O60343 1298 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 C8AP07357 584 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 POU2F2P09086 479 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 HNRNPA1P09651 372 aaKnown RBP eCLIP14.24□□□□□ -0.13
VRK3-203ENST00000424804 GLULP15104 373 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 FSHRP23945 695 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 HOXA9P31269 272 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 OR1D2P34982 312 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 PRPHP41219 470 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 BRCC3P46736 316 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 EFNA5P52803 228 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 PPP2R5AQ15172 486 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 SF3A1Q15459 793 aaKnown RBP14.24□□□□□ -0.13
VRK3-203ENST00000424804 DCAF4L1Q3SXM0 396 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 RINT1Q6NUQ1 792 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 ELMSAN1Q6PJG2 1045 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 DCLRE1AQ6PJP8 1040 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 PARM1Q6UWI2 310 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.24□□□□□ -0.13
VRK3-203ENST00000424804 GET4Q7L5D6 327 aaPredicted RBP14.24□□□□□ -0.13
VRK3-203ENST00000424804 DDX27Q96GQ7 796 aaKnown RBP14.24□□□□□ -0.13
VRK3-203ENST00000424804 CDK5RAP3Q96JB5 506 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 RUSC1Q9BVN2 902 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 TMEM134Q9H6X4 195 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 PIDD1Q9HB75 910 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 HCFC1R1Q9NWW0 138 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 DNMT3BQ9UBC3 853 aaKnown RBP14.24□□□□□ -0.13
VRK3-203ENST00000424804 FBXL21Q9UKT6 434 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 CA14Q9ULX7 337 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 NUMBLQ9Y6R0 609 aa14.24□□□□□ -0.13
VRK3-203ENST00000424804 PDCD11Q14690 1871 aaKnown RBP14.24□□□□□ -0.13
VRK3-203ENST00000424804 I3L4J1 428 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 K7ERI5 159 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 CCL16O15467 120 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 STX6O43752 255 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 TKTP29401 623 aaKnown RBP14.23□□□□□ -0.13
VRK3-203ENST00000424804 GRM5P41594 1212 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 PEX3P56589 373 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 GPC5P78333 572 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 ELAVL2Q12926 359 aaKnown RBP14.23□□□□□ -0.13
VRK3-203ENST00000424804 RESTQ13127 1097 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 ANGPT1Q15389 498 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 PHLDB3Q6NSJ2 640 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 TMEM130Q8N3G9 435 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 RASSF8Q8NHQ8 419 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 FGF13Q92913 245 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 ZBTB45Q96K62 511 aaPredicted RBP14.23□□□□□ -0.13
VRK3-203ENST00000424804 IFT74Q96LB3 600 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 PNMA5Q96PV4 448 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 ADPGKQ9BRR6 497 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 NTPCRQ9BSD7 190 aaKnown RBP14.23□□□□□ -0.13
VRK3-203ENST00000424804 TARS2Q9BW92 718 aaKnown RBP14.23□□□□□ -0.13
VRK3-203ENST00000424804 TBC1D17Q9HA65 648 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 CDH7Q9ULB5 785 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 BACE2Q9Y5Z0 518 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 STK24Q9Y6E0 443 aa14.23□□□□□ -0.13
VRK3-203ENST00000424804 MYH11P35749 1972 aa14.22□□□□□ -0.13
VRK3-203ENST00000424804 SFI1A8K8P3 1242 aa14.22□□□□□ -0.13
VRK3-203ENST00000424804 NRG2O14511 850 aaPredicted RBP14.22□□□□□ -0.13
VRK3-203ENST00000424804 HIP1RO75146 1068 aa14.22□□□□□ -0.13
VRK3-203ENST00000424804 B3GAT3O94766 335 aa14.22□□□□□ -0.13
VRK3-203ENST00000424804 MRPL58Q14197 206 aaKnown RBP14.22□□□□□ -0.13
VRK3-203ENST00000424804 UVSSAQ2YD98 709 aa14.22□□□□□ -0.13
VRK3-203ENST00000424804 FOXD4L6Q3SYB3 417 aaPredicted RBP14.22□□□□□ -0.13
VRK3-203ENST00000424804 PPM1LQ5SGD2 360 aa14.22□□□□□ -0.13
VRK3-203ENST00000424804 HYIQ5T013 277 aa14.22□□□□□ -0.13
VRK3-203ENST00000424804 AXDND1Q5T1B0 1012 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms