RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 MAP1BP46821 2468 aaKnown RBP18.51■□□□□ 0.55
CHCHD3-202ENST00000423635 VWA8A3KMH1 1905 aa18.51■□□□□ 0.55
CHCHD3-202ENST00000423635 F5P12259 2224 aa18.51■□□□□ 0.55
CHCHD3-202ENST00000423635 ARHGEF37A1IGU5 675 aa18.5■□□□□ 0.55
CHCHD3-202ENST00000423635 MICAL2O94851 1124 aa18.5■□□□□ 0.55
CHCHD3-202ENST00000423635 XRCC6P12956 609 aaKnown RBP eCLIP18.5■□□□□ 0.55
CHCHD3-202ENST00000423635 PTPN2P17706 415 aa18.5■□□□□ 0.55
CHCHD3-202ENST00000423635 RBM25P49756 843 aaKnown RBP18.5■□□□□ 0.55
CHCHD3-202ENST00000423635 IRX6P78412 446 aaPredicted RBP18.5■□□□□ 0.55
CHCHD3-202ENST00000423635 PPP2R5DQ14738 602 aa18.5■□□□□ 0.55
CHCHD3-202ENST00000423635 RUFY3Q7L099 469 aa18.5■□□□□ 0.55
CHCHD3-202ENST00000423635 POLR3FQ9H1D9 316 aaPredicted RBP18.5■□□□□ 0.55
CHCHD3-202ENST00000423635 DAXXQ9UER7 740 aaPredicted RBP18.5■□□□□ 0.55
CHCHD3-202ENST00000423635 CDY1Q9Y6F8 540 aa18.5■□□□□ 0.55
CHCHD3-202ENST00000423635 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.5■□□□□ 0.55
CHCHD3-202ENST00000423635 FCARP24071 287 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 PPM1JQ5JR12 505 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 CDCA2Q69YH5 1023 aaPredicted RBP18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 CPLX2Q6PUV4 134 aaKnown RBP18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 CD300LGQ6UXG3 332 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 PIK3AP1Q6ZUJ8 805 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 PDZD7Q9H5P4 517 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 ZSWIM6Q9HCJ5 1215 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 TTLL13PA6NNM8 815 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 N4BP3O15049 544 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 RECQL4O94761 1208 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 IGFBP6P24592 240 aaPredicted RBP18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 CCR3P51677 355 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 PRSS36Q5K4E3 855 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 ANKS3Q6ZW76 656 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 SKAP1Q86WV1 359 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 MAP4K3Q8IVH8 894 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 ZNF461Q8TAF7 563 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 IRF7Q92985 503 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 BRD9Q9H8M2 597 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 LMAN1LQ9HAT1 526 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 ZFP14Q9HCL3 533 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 NDRG2Q9UN36 371 aaKnown RBP18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 PCDHA12Q9UN75 941 aa18.49■□□□□ 0.55
CHCHD3-202ENST00000423635 CHD8Q9HCK8 2581 aa18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 LRRIQ4A6NIV6 560 aa18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 B3GAT3O94766 335 aa18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 ABLIM3O94929 683 aa18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 CEBPBP17676 345 aa18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 CSRP2Q16527 193 aa18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 LPAL2Q16609 132 aa18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 EARS2Q5JPH6 523 aaKnown RBP18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 SLC8B1Q6J4K2 584 aa18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 OXER1Q8TDS5 423 aa18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 FAM3CQ92520 227 aa18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 TRMT61BQ9BVS5 477 aaKnown RBP18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 ZNF334Q9HCZ1 680 aaPredicted RBP18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 SEMA4GQ9NTN9 838 aa18.48■□□□□ 0.55
CHCHD3-202ENST00000423635 ZNF197O14709 1029 aa18.47■□□□□ 0.55
CHCHD3-202ENST00000423635 TRAPPC3O43617 180 aa18.47■□□□□ 0.55
CHCHD3-202ENST00000423635 GRM2Q14416 872 aa18.47■□□□□ 0.55
CHCHD3-202ENST00000423635 UPP1Q16831 310 aa18.47■□□□□ 0.55
CHCHD3-202ENST00000423635 FAM78AQ5JUQ0 283 aa18.47■□□□□ 0.55
CHCHD3-202ENST00000423635 NOSTRINQ8IVI9 506 aa18.47■□□□□ 0.55
CHCHD3-202ENST00000423635 ZBTB8OSQ8IWT0 167 aa18.47■□□□□ 0.55
CHCHD3-202ENST00000423635 PIGOQ8TEQ8 1089 aa18.47■□□□□ 0.55
CHCHD3-202ENST00000423635 DDX27Q96GQ7 796 aaKnown RBP18.47■□□□□ 0.55
CHCHD3-202ENST00000423635 CHAMP1Q96JM3 812 aa18.47■□□□□ 0.55
CHCHD3-202ENST00000423635 ASB16Q96NS5 453 aa18.47■□□□□ 0.55
CHCHD3-202ENST00000423635 PPP1R10Q96QC0 940 aaKnown RBP18.47■□□□□ 0.55
CHCHD3-202ENST00000423635 GPRC5CQ9NQ84 441 aa18.47■□□□□ 0.55
CHCHD3-202ENST00000423635 ACKR2O00590 384 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 NRG2O14511 850 aaPredicted RBP18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 HRO43593 1189 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 FOXD2O60548 495 aaPredicted RBP18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 LRG1P02750 347 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 CHRNB1P11230 501 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 ATF2P15336 505 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 XBP1P17861 261 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 PSMC3P17980 439 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 TKTP29401 623 aaKnown RBP18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 CNR2P34972 360 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 CXCL12P48061 93 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 CLCNKBP51801 687 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 MLLT6P55198 1093 aaPredicted RBP18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 PRPF4BQ13523 1007 aaKnown RBP18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 PRR23CQ6ZRP0 262 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 MCPH1Q8NEM0 835 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 CCDC43Q96MW1 224 aaKnown RBP18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 UROC1Q96N76 676 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 ADPGKQ9BRR6 497 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 C2orf40Q9H1Z8 148 aa18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 TTC12Q9H892 705 aaPredicted RBP18.46■□□□□ 0.55
CHCHD3-202ENST00000423635 USP24Q9UPU5 2620 aa18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 A0A087WWV3 80 aa18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 USO1O60763 962 aaKnown RBP18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 ELF1P32519 619 aa18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 ROR1Q01973 937 aa18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 STK3Q13188 491 aa18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 SIM2Q14190 667 aaPredicted RBP18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 MAPK6Q16659 721 aa18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 PRR23BQ6ZRT6 265 aa18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 MAEAQ7L5Y9 396 aa18.45■□□□□ 0.54
CHCHD3-202ENST00000423635 TCEAL8Q8IYN2 117 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms