RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 PMS2P54278 862 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 ZBED6P86452 979 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 CCDC15Q0P6D6 951 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 TRIM32Q13049 653 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 IRAK1BP1Q5VVH5 260 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 FOXP4Q8IVH2 680 aaPredicted RBP14.25□□□□□ -0.13
COL20A1-203ENST00000422202 ZNF560Q96MR9 790 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 SLC30A1Q9Y6M5 507 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 WDR62O43379 1518 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 CHGBP05060 677 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 R3HDM1Q15032 1099 aaKnown RBP14.25□□□□□ -0.13
COL20A1-203ENST00000422202 SNX17Q15036 470 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 MAPRE1Q15691 268 aaKnown RBP14.25□□□□□ -0.13
COL20A1-203ENST00000422202 GPT2Q8TD30 523 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 MPP6Q9NZW5 540 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 ZC3H7BQ9UGR2 993 aaKnown RBP14.25□□□□□ -0.13
COL20A1-203ENST00000422202 SLC39A10Q9ULF5 831 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 PBLDP30039 288 aaPredicted RBP14.25□□□□□ -0.13
COL20A1-203ENST00000422202 SPP2Q13103 211 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 TLR7Q9NYK1 1049 aaKnown RBP14.25□□□□□ -0.13
COL20A1-203ENST00000422202 CDH2P19022 906 aaPredicted RBP14.25□□□□□ -0.13
COL20A1-203ENST00000422202 ZMYM1Q5SVZ6 1142 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 SNF8Q96H20 258 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 MRPL1Q9BYD6 325 aaKnown RBP14.25□□□□□ -0.13
COL20A1-203ENST00000422202 PIK3C2GO75747 1445 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 USP39Q53GS9 565 aaKnown RBP14.25□□□□□ -0.13
COL20A1-203ENST00000422202 HAUS6Q7Z4H7 955 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 KATNAL1Q9BW62 490 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 RNF146Q9NTX7 359 aa14.25□□□□□ -0.13
COL20A1-203ENST00000422202 GPATCH8Q9UKJ3 1502 aaKnown RBP14.24□□□□□ -0.13
COL20A1-203ENST00000422202 FAM196BA6NMK8 535 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 FAM107AO95990 144 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 KLHL24Q6TFL4 600 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 ZFATQ9P243 1243 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 DNAJC5BQ9UF47 199 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 GUCY1A3Q02108 690 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 TRADDQ15628 312 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 KYAT1Q16773 422 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 CDR2LQ86X02 465 aaPredicted RBP14.24□□□□□ -0.13
COL20A1-203ENST00000422202 TBC1D22BQ9NU19 505 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 ZBTB12Q9Y330 459 aaPredicted RBP14.24□□□□□ -0.13
COL20A1-203ENST00000422202 GRIN3BO60391 1043 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 PLEKHA8P1O95397 391 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 GRAPQ13588 217 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 PLCL1Q15111 1095 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 GRAPLQ8TC17 118 aaPredicted RBP14.24□□□□□ -0.13
COL20A1-203ENST00000422202 PARVBQ9HBI1 364 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 NSMCE4AQ9NXX6 385 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 SSH2Q76I76 1423 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 POTEMA6NI47 508 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 C6orf222P0C671 652 aaPredicted RBP14.24□□□□□ -0.13
COL20A1-203ENST00000422202 MTERF3Q96E29 417 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 MFSD1Q9H3U5 465 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 AGO2Q9UKV8 859 aaKnown RBP14.24□□□□□ -0.13
COL20A1-203ENST00000422202 ABCA5Q8WWZ7 1642 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 NFICP08651 508 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 ENO3P13929 434 aaPredicted RBP14.24□□□□□ -0.13
COL20A1-203ENST00000422202 ARFIP2P53365 341 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 RUNX1T1Q06455 604 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 LUZP2Q86TE4 346 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 CCDC60Q8IWA6 550 aaPredicted RBP14.24□□□□□ -0.13
COL20A1-203ENST00000422202 PUS7LQ9H0K6 701 aaKnown RBP14.24□□□□□ -0.13
COL20A1-203ENST00000422202 RNF103O00237 685 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 ZBTB5O15062 677 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 SERPINB4P48594 390 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 NR1H3Q13133 447 aa14.24□□□□□ -0.13
COL20A1-203ENST00000422202 C3orf70A6NLC5 250 aaPredicted RBP14.23□□□□□ -0.13
COL20A1-203ENST00000422202 TTLL13PA6NNM8 815 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 PGK2P07205 417 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 QARSP47897 775 aaKnown RBP14.23□□□□□ -0.13
COL20A1-203ENST00000422202 ZNF589Q86UQ0 364 aaPredicted RBP14.23□□□□□ -0.13
COL20A1-203ENST00000422202 BBS7Q8IWZ6 715 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 PNKPQ96T60 521 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 ZBTB1Q9Y2K1 713 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 SH2B2O14492 632 aaPredicted RBP14.23□□□□□ -0.13
COL20A1-203ENST00000422202 PRPF3O43395 683 aaKnown RBP14.23□□□□□ -0.13
COL20A1-203ENST00000422202 H2AFYO75367 372 aaKnown RBP14.23□□□□□ -0.13
COL20A1-203ENST00000422202 SFR1Q86XK3 245 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 SLC44A2Q8IWA5 706 aaPredicted RBP14.23□□□□□ -0.13
COL20A1-203ENST00000422202 TSPAN17Q96FV3 270 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 CEP95Q96GE4 821 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 CALR3Q96L12 384 aaKnown RBP14.23□□□□□ -0.13
COL20A1-203ENST00000422202 USP17L15C9J2P7 530 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 USP17L13C9JLJ4 530 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 USP17L11C9JVI0 530 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 USP17L18D6R9N7 530 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 USP17L22D6RA61 530 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 USP17L17D6RBQ6 530 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 USP17L19D6RCP7 530 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 USP17L20D6RJB6 530 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 RPS6P62753 249 aaKnown RBP14.23□□□□□ -0.13
COL20A1-203ENST00000422202 YWHAZP63104 245 aaKnown RBP14.23□□□□□ -0.13
COL20A1-203ENST00000422202 KDSRQ06136 332 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 USP17L24Q0WX57 530 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 KCNH2Q12809 1159 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 LRRC36Q1X8D7 754 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 USP17L6PQ6QN14 398 aa14.23□□□□□ -0.13
COL20A1-203ENST00000422202 C11orf57Q6ZUT1 292 aaPredicted RBP14.23□□□□□ -0.13
COL20A1-203ENST00000422202 FHDC1Q9C0D6 1143 aaPredicted RBP14.23□□□□□ -0.13
COL20A1-203ENST00000422202 SPACA6W5XKT8 324 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms