RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 IFT74Q96LB3 600 aa18.56■□□□□ 0.56
UPF3AP3-201ENST00000420996 UROC1Q96N76 676 aa18.56■□□□□ 0.56
UPF3AP3-201ENST00000420996 FBXO4Q9UKT5 387 aa18.56■□□□□ 0.56
UPF3AP3-201ENST00000420996 CDY1Q9Y6F8 540 aa18.56■□□□□ 0.56
UPF3AP3-201ENST00000420996 COL4A3Q01955 1670 aa18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 KINO60870 393 aaKnown RBP18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 OR52Z1P0C646 297 aa18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 MAGEA9P43362 315 aa18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 CLCNKBP51801 687 aa18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 ORC2Q13416 577 aaPredicted RBP18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 UBXN2BQ14CS0 331 aa18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 UPP1Q16831 310 aa18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 GLRA4Q5JXX5 417 aa18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 ATF7IP2Q5U623 682 aa18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 ANKS3Q6ZW76 656 aa18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 KIFAP3Q92845 792 aa18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 HINFPQ9BQA5 517 aa18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 KXD1Q9BQD3 176 aa18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 SPATA6Q9NWH7 488 aaPredicted RBP18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 MTF2Q9Y483 593 aaPredicted RBP18.55■□□□□ 0.56
UPF3AP3-201ENST00000420996 FAM170BA6NMN3 283 aa18.54■□□□□ 0.56
UPF3AP3-201ENST00000420996 LAMTOR5O43504 91 aa18.54■□□□□ 0.56
UPF3AP3-201ENST00000420996 TKTP29401 623 aaKnown RBP18.54■□□□□ 0.56
UPF3AP3-201ENST00000420996 ZNF174Q15697 407 aa18.54■□□□□ 0.56
UPF3AP3-201ENST00000420996 SUMF1Q8NBK3 374 aa18.54■□□□□ 0.56
UPF3AP3-201ENST00000420996 DDX27Q96GQ7 796 aaKnown RBP18.54■□□□□ 0.56
UPF3AP3-201ENST00000420996 NELL2Q99435 816 aa18.54■□□□□ 0.56
UPF3AP3-201ENST00000420996 KIFC3Q9BVG8 833 aa18.54■□□□□ 0.56
UPF3AP3-201ENST00000420996 LTB4R2Q9NPC1 389 aa18.54■□□□□ 0.56
UPF3AP3-201ENST00000420996 AVENQ9NQS1 362 aaPredicted RBP18.54■□□□□ 0.56
UPF3AP3-201ENST00000420996 GDE1Q9NZC3 331 aa18.54■□□□□ 0.56
UPF3AP3-201ENST00000420996 MRPS23Q9Y3D9 190 aaKnown RBP18.54■□□□□ 0.56
UPF3AP3-201ENST00000420996 SMIM28A0A1B0GU29 152 aa18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 K7ERI5 159 aa18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 ECI2O75521 394 aa18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 RHOP08100 348 aa18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 NEK4P51957 841 aa18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 GUCY1B3Q02153 619 aa18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 PUM1Q14671 1186 aaKnown RBP eCLIP18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 OTOGLQ3ZCN5 2332 aa18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 HAUS3Q68CZ6 603 aa18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 DGLUCYQ7Z3D6 616 aa18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 C3orf58Q8NDZ4 430 aa18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 ZNF461Q8TAF7 563 aa18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 ING5Q8WYH8 240 aa18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 POLD4Q9HCU8 107 aa18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 TNFSF13BQ9Y275 285 aa18.53■□□□□ 0.56
UPF3AP3-201ENST00000420996 ARHGEF37A1IGU5 675 aa18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 I3L4J1 428 aa18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 CD72P21854 359 aa18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 CCT6AP40227 531 aaKnown RBP18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 GRM5P41594 1212 aa18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 BRCC3P46736 316 aa18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 ST3GAL1Q11201 340 aa18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 XKR4Q5GH76 650 aa18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 ZBTB41Q5SVQ8 909 aa18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 SLC8B1Q6J4K2 584 aa18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 DCLK2Q8N568 766 aa18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 CLDN23Q96B33 292 aa18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 MCRS1Q96EZ8 462 aa18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 BHMT2Q9H2M3 363 aa18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 FOXP1Q9H334 677 aaPredicted RBP18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 GOLGA2P5Q9HBQ8 144 aa18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 TOPORSQ9NS56 1045 aaPredicted RBP18.52■□□□□ 0.56
UPF3AP3-201ENST00000420996 CACNA1AO00555 2505 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 SPTLC1O15269 473 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 NCAM2O15394 837 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 ABLIM3O94929 683 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 PTPN2P17706 415 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 YARSP54577 528 aaKnown RBP18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 ROR1Q01973 937 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 CSTF1Q05048 431 aaKnown RBP18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 ECM1Q16610 540 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 SLC5A9Q2M3M2 681 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 ALKAL1Q6UXT8 129 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 C8orf76Q96K31 380 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 CCDC94Q9BW85 323 aaPredicted RBP18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 PLA2G2FQ9BZM2 168 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 SLC38A7Q9NVC3 462 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 PCDHGA2Q9Y5H1 932 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 DMXL1Q9Y485 3027 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 WDR87Q6ZQQ6 2873 aa18.51■□□□□ 0.55
UPF3AP3-201ENST00000420996 LRG1P02750 347 aa18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 ELF1P32519 619 aa18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 RPS9P46781 194 aaKnown RBP18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 FXR2P51116 673 aaKnown RBP eCLIP18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 SOX4Q06945 474 aaPredicted RBP18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 TTC38Q5R3I4 469 aa18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 VARS2Q5ST30 1063 aaKnown RBP18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 TPRG1Q6ZUI0 275 aa18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 ATRIPQ8WXE1 791 aa18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 ELSPBP1Q96BH3 223 aa18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 ACO2Q99798 780 aaKnown RBP18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 CDT1Q9H211 546 aa18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 TMEM134Q9H6X4 195 aa18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 PTPRHQ9HD43 1115 aa18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 DLL3Q9NYJ7 618 aa18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 LRWD1Q9UFC0 647 aa18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 KIAA1024Q9UPX6 916 aa18.5■□□□□ 0.55
UPF3AP3-201ENST00000420996 CITO14578 2027 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms