RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 CATSPER3Q86XQ3 398 aa15.73■□□□□ 0.11
NFE4-201ENST00000420058 ING5Q8WYH8 240 aa15.73■□□□□ 0.11
NFE4-201ENST00000420058 MCRS1Q96EZ8 462 aa15.73■□□□□ 0.11
NFE4-201ENST00000420058 CNTNAP3BQ96NU0 1288 aa15.73■□□□□ 0.11
NFE4-201ENST00000420058 PPP1R10Q96QC0 940 aaKnown RBP15.73■□□□□ 0.11
NFE4-201ENST00000420058 CNTNAP3Q9BZ76 1288 aa15.73■□□□□ 0.11
NFE4-201ENST00000420058 EPC1Q9H2F5 836 aa15.73■□□□□ 0.11
NFE4-201ENST00000420058 TMEM60Q9H2L4 133 aa15.73■□□□□ 0.11
NFE4-201ENST00000420058 ZSCAN32Q9NX65 697 aa15.73■□□□□ 0.11
NFE4-201ENST00000420058 ORC3Q9UBD5 711 aaPredicted RBP15.73■□□□□ 0.11
NFE4-201ENST00000420058 CNOT1A5YKK6 2376 aaKnown RBP15.73■□□□□ 0.11
NFE4-201ENST00000420058 TMEM189-UBE2V1I3L0A0 370 aa15.72■□□□□ 0.11
NFE4-201ENST00000420058 ACKR2O00590 384 aa15.72■□□□□ 0.11
NFE4-201ENST00000420058 MED24O75448 989 aa15.72■□□□□ 0.11
NFE4-201ENST00000420058 ECI2O75521 394 aa15.72■□□□□ 0.11
NFE4-201ENST00000420058 CDKL5O76039 1030 aa15.72■□□□□ 0.11
NFE4-201ENST00000420058 RPS9P46781 194 aaKnown RBP15.72■□□□□ 0.11
NFE4-201ENST00000420058 PFKPQ01813 784 aa15.72■□□□□ 0.11
NFE4-201ENST00000420058 ELAVL2Q12926 359 aaKnown RBP15.72■□□□□ 0.11
NFE4-201ENST00000420058 RTL10Q7L3V2 364 aa15.72■□□□□ 0.11
NFE4-201ENST00000420058 C3orf58Q8NDZ4 430 aa15.72■□□□□ 0.11
NFE4-201ENST00000420058 AVENQ9NQS1 362 aaPredicted RBP15.72■□□□□ 0.11
NFE4-201ENST00000420058 PRMT8Q9NR22 394 aaPredicted RBP15.72■□□□□ 0.11
NFE4-201ENST00000420058 BACE2Q9Y5Z0 518 aa15.72■□□□□ 0.11
NFE4-201ENST00000420058 CDY1Q9Y6F8 540 aa15.72■□□□□ 0.11
NFE4-201ENST00000420058 PATJQ8NI35 1801 aa15.72■□□□□ 0.11
NFE4-201ENST00000420058 USP24Q9UPU5 2620 aa15.72■□□□□ 0.11
NFE4-201ENST00000420058 BTBD18B2RXH4 712 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 N4BP3O15049 544 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 TBC1D4O60343 1298 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 KRT37O76014 449 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 RHOP08100 348 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 XBP1P17861 261 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 FCARP24071 287 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 TKTP29401 623 aaKnown RBP15.71■□□□□ 0.11
NFE4-201ENST00000420058 KRT2P35908 639 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 MAGEA9P43362 315 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 RBM25P49756 843 aaKnown RBP15.71■□□□□ 0.11
NFE4-201ENST00000420058 CLCNKBP51801 687 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 UPP1Q16831 310 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 NT5DC1Q5TFE4 455 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 PDXDC1Q6P996 788 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 TPRG1Q6ZUI0 275 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 ATRIPQ8WXE1 791 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 DDX27Q96GQ7 796 aaKnown RBP15.71■□□□□ 0.11
NFE4-201ENST00000420058 NELL2Q99435 816 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 POLD4Q9HCU8 107 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 PARD6AQ9NPB6 346 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 HEBP1Q9NRV9 189 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 GDE1Q9NZC3 331 aa15.71■□□□□ 0.11
NFE4-201ENST00000420058 MRPS23Q9Y3D9 190 aaKnown RBP15.71■□□□□ 0.11
NFE4-201ENST00000420058 ARHGEF37A1IGU5 675 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 I3L4J1 428 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 B3GAT3O94766 335 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 ABLIM3O94929 683 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 PRKCBP05771 671 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 CEBPBP17676 345 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 ATP2B1P20020 1258 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 BRCC3P46736 316 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 SOX4Q06945 474 aaPredicted RBP15.7■□□□□ 0.1
NFE4-201ENST00000420058 MTAPQ13126 283 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 PRPF4BQ13523 1007 aaKnown RBP15.7■□□□□ 0.1
NFE4-201ENST00000420058 PRSS36Q5K4E3 855 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 ALKAL1Q6UXT8 129 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 MCPH1Q8NEM0 835 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 TCEAL4Q96EI5 215 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 GOLGA2P5Q9HBQ8 144 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 NCDNQ9UBB6 729 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 SMG5Q9UPR3 1016 aaKnown RBP15.7■□□□□ 0.1
NFE4-201ENST00000420058 GDAQ9Y2T3 454 aa15.7■□□□□ 0.1
NFE4-201ENST00000420058 TRIP11Q15643 1979 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 CYP11B2P19099 503 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 CCR2P41597 374 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 ADCY1Q08828 1119 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 MAPK6Q16659 721 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 XKR4Q5GH76 650 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 GLRA4Q5JXX5 417 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 SLC8B1Q6J4K2 584 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 ZNF852Q6ZMS4 543 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 MAMSTRQ6ZN01 415 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 ZBTB8OSQ8IWT0 167 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 NECAB1Q8N987 351 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 ELSPBP1Q96BH3 223 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 KIFC3Q9BVG8 833 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 TUFT1Q9NNX1 390 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 CEP295Q9C0D2 2601 aa15.69■□□□□ 0.1
NFE4-201ENST00000420058 SMIM28A0A1B0GU29 152 aa15.68■□□□□ 0.1
NFE4-201ENST00000420058 NEMFO60524 1076 aa15.68■□□□□ 0.1
NFE4-201ENST00000420058 MOSPD3O75425 235 aa15.68■□□□□ 0.1
NFE4-201ENST00000420058 LARGE1O95461 756 aa15.68■□□□□ 0.1
NFE4-201ENST00000420058 SEC24AO95486 1093 aa15.68■□□□□ 0.1
NFE4-201ENST00000420058 ROR1Q01973 937 aa15.68■□□□□ 0.1
NFE4-201ENST00000420058 MRPL58Q14197 206 aaKnown RBP15.68■□□□□ 0.1
NFE4-201ENST00000420058 ECM1Q16610 540 aa15.68■□□□□ 0.1
NFE4-201ENST00000420058 FAM78AQ5JUQ0 283 aa15.68■□□□□ 0.1
NFE4-201ENST00000420058 PADI6Q6TGC4 694 aa15.68■□□□□ 0.1
NFE4-201ENST00000420058 GPR161Q8N6U8 529 aaKnown RBP15.68■□□□□ 0.1
NFE4-201ENST00000420058 ZNF461Q8TAF7 563 aa15.68■□□□□ 0.1
NFE4-201ENST00000420058 ZSWIM3Q96MP5 696 aa15.68■□□□□ 0.1
NFE4-201ENST00000420058 NACC1Q96RE7 527 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms