RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 POLGP54098 1239 aaPredicted RBP12.42□□□□□ -0.42
DDR1-232ENST00000418800 PPP2R5CQ13362 524 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 IZUMO3Q5VZ72 239 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 PPP4R3CPQ6ZMV5 832 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 NLRP9Q7RTR0 991 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 RBM15Q96T37 977 aaKnown RBP eCLIP12.42□□□□□ -0.42
DDR1-232ENST00000418800 ZSWIM1Q9BR11 485 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 APEX2Q9UBZ4 518 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 LRCH1Q9Y2L9 728 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 ARFGEF2Q9Y6D5 1785 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 NHSL1Q5SYE7 1610 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 PHRF1Q9P1Y6 1649 aaKnown RBP12.42□□□□□ -0.42
DDR1-232ENST00000418800 C2orf71A6NGG8 1288 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 PDXKO00764 312 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 ATP6V1B1P15313 513 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 SERPINB6P35237 376 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 EPHB1P54762 984 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 SHROOM1Q2M3G4 852 aaPredicted RBP12.42□□□□□ -0.42
DDR1-232ENST00000418800 P3H1Q32P28 736 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 EDRF1Q3B7T1 1238 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 TBC1D25Q3MII6 688 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 ZCWPW2Q504Y3 356 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 ASPRV1Q53RT3 343 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 ZDHHC24Q6UX98 284 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 SYT2Q8N9I0 419 aaPredicted RBP12.42□□□□□ -0.42
DDR1-232ENST00000418800 PPP1R14CQ8TAE6 165 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 PRPF31Q8WWY3 499 aaKnown RBP12.42□□□□□ -0.42
DDR1-232ENST00000418800 DHX38Q92620 1227 aaKnown RBP12.42□□□□□ -0.42
DDR1-232ENST00000418800 EIF2AK1Q9BQI3 630 aaKnown RBP12.42□□□□□ -0.42
DDR1-232ENST00000418800 PI4K2AQ9BTU6 479 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 SHCBP1LQ9BZQ2 653 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 TRABDQ9H4I3 376 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 SUDS3Q9H7L9 328 aaPredicted RBP12.42□□□□□ -0.42
DDR1-232ENST00000418800 HOMER2Q9NSB8 354 aa12.42□□□□□ -0.42
DDR1-232ENST00000418800 FAM47DPA6NHR8 397 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 FAM200BP0CF97 657 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 DESP17661 470 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 PGM1P36871 562 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 DLG4P78352 724 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 GRAMD1BQ3KR37 738 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 ZBED8Q8IZ13 594 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 RAB3IL1Q8TBN0 382 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 CKAP2Q8WWK9 683 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 CENPKQ9BS16 269 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 LNPEPQ9UIQ6 1025 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 SERPINB13Q9UIV8 391 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.41□□□□□ -0.42
DDR1-232ENST00000418800 WASF2Q9Y6W5 498 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 LMO7Q8WWI1 1683 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 ABCB11O95342 1321 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 NID2Q14112 1375 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 ENO1P06733 434 aaKnown RBP12.41□□□□□ -0.42
DDR1-232ENST00000418800 NUDT17P0C025 328 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 BMP3P12645 472 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 CERKLQ49MI3 558 aaPredicted RBP12.41□□□□□ -0.42
DDR1-232ENST00000418800 LRRC74BQ6ZQY2 392 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 SLFN12Q8IYM2 578 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 RNF168Q8IYW5 571 aaPredicted RBP12.41□□□□□ -0.42
DDR1-232ENST00000418800 H3BRJ5 948 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 DDX3YO15523 660 aaKnown RBP12.41□□□□□ -0.42
DDR1-232ENST00000418800 USP1O94782 785 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 ZSCAN5DPP0CG00 497 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 FOXN2P32314 431 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 MXI1P50539 228 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 TMEM119Q4V9L6 283 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 ZC3H12AQ5D1E8 599 aaKnown RBP12.41□□□□□ -0.42
DDR1-232ENST00000418800 C1orf146Q5VVC0 180 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 SLC47A2Q86VL8 602 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 PHC3Q8NDX5 983 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 TBC1D16Q8TBP0 767 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 UTP4Q969X6 686 aaKnown RBP12.41□□□□□ -0.42
DDR1-232ENST00000418800 MMADHCQ9H3L0 296 aaPredicted RBP12.41□□□□□ -0.42
DDR1-232ENST00000418800 C10orf88Q9H8K7 445 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 HEY2Q9UBP5 337 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 CHKBQ9Y259 395 aa12.41□□□□□ -0.42
DDR1-232ENST00000418800 CCDC195A0A1B0GUA6 201 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 SUPT3HO75486 399 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 PGM3O95394 542 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 GJB6O95452 261 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 USP46P62068 366 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 PPP1R18Q6NYC8 613 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 RASSF3Q86WH2 238 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 THTPAQ9BU02 230 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 TMEM117Q9H0C3 514 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 OCEL1Q9H607 264 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 DNAJC18Q9H819 358 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 ZDHHC18Q9NUE0 388 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 PPARGC1AQ9UBK2 798 aaKnown RBP12.4□□□□□ -0.42
DDR1-232ENST00000418800 MAGEA13PA6NCF6 341 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 MIF4GDA9UHW6 222 aaKnown RBP12.4□□□□□ -0.42
DDR1-232ENST00000418800 SGK1O00141 431 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 O00370 1275 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 ATP2A1O14983 1001 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 ATP5HO75947 161 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 KRT10P13645 584 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 MGAT5Q09328 741 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 RRP1BQ14684 758 aaKnown RBP12.4□□□□□ -0.42
DDR1-232ENST00000418800 BBS9Q3SYG4 887 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 IRGCQ6NXR0 463 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 FBXO11Q86XK2 927 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms