RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 TRIM71Q2Q1W2 868 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 STPG1Q5TH74 334 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 ICE2Q659A1 982 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 KIAA1841Q6NSI8 718 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 SLC4A10Q6U841 1118 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 ACAD11Q709F0 780 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 EEPD1Q7L9B9 569 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 MCATQ8IVS2 390 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 CASP10Q92851 521 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 NSUN4Q96CB9 384 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 TMEM87BQ96K49 555 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 TSPAN18Q96SJ8 248 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 MYL10Q9BUA6 226 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 FOXQ1Q9C009 403 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 GSX1Q9H4S2 264 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 SH2D4AQ9H788 454 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 VCPKMTQ9H867 229 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 VTA1Q9NP79 307 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 IGSF9Q9P2J2 1179 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 FBXO40Q9UH90 709 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 PCDHB10Q9UN67 800 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 RIPK3Q9Y572 518 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 PAXBP1Q9Y5B6 917 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 MCM3APO60318 1980 aa6.27□□□□□ -1.4
ECHDC1-206ENST00000417628 PATJQ8NI35 1801 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 CCDC196A0A1B0GTZ2 297 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 PPP1R12AO14974 1030 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 LRRN2O75325 713 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 TIAF1O95411 115 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 BAG3O95817 575 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 ZNF853P0CG23 659 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 SRFP11831 508 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 DRD2P14416 443 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 MAGEA9P43362 315 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 UBE3AQ05086 875 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 SOX4Q06945 474 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 NONOQ15233 471 aaKnown RBP eCLIP6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 NKG7Q16617 165 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 CCDC96Q2M329 555 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 CT47A1Q5JQC4 288 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 IGF2-ASQ6U949 168 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 OTOP3Q7RTS5 596 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 HID1Q8IV36 788 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 MRPL41Q8IXM3 137 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 ZNF843Q8N446 348 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 SVOPQ8N4V2 548 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 C8orf58Q8NAV2 365 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 FAM13CQ8NE31 585 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 ZNF507Q8TCN5 953 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 KLHL6Q8WZ60 621 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 SUCLG2Q96I99 432 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 GPR20Q99678 358 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 PAIP2Q9BPZ3 127 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 PRMT8Q9NR22 394 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 ENAMQ9NRM1 1142 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 AATFQ9NY61 560 aaKnown RBP eCLIP6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 C9orf78Q9NZ63 289 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 NOL7Q9UMY1 257 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 SLC12A7Q9Y666 1083 aa6.27□□□□□ -1.41
ECHDC1-206ENST00000417628 DSPP15924 2871 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 RSPH10B2B2RC85 870 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 MPHOSPH10O00566 681 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 WEE2P0C1S8 567 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 RSPH10BP0C881 870 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 SHMT1P34896 483 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 NOP2P46087 812 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 IFRD2Q12894 506 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 SLBPQ14493 270 aaKnown RBP eCLIP6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 SF3A2Q15428 464 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 MUM1L1Q5H9M0 696 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 BEND3Q5T5X7 828 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 SLC6A19Q695T7 634 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 KIAA1211LQ6NV74 962 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 DCLRE1AQ6PJP8 1040 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 VHLLQ6RSH7 139 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 TSSK4Q6SA08 328 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 RINLQ6ZS11 566 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 SPATC1Q76KD6 591 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 ATG9AQ7Z3C6 839 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 EXOC8Q8IYI6 725 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 SLFN12Q8IYM2 578 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 TMTC2Q8N394 836 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 ZNF513Q8N8E2 541 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 CHST13Q8NET6 341 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 KLHDC4Q8TBB5 520 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 APBB2Q92870 758 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 ISL2Q96A47 359 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 ZNF689Q96CS4 500 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 WDR11Q9BZH6 1224 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 MRPL18Q9H0U6 180 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 ATXN3LQ9H3M9 355 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 BCAS3Q9H6U6 928 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 CYP4F12Q9HCS2 524 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 OGFRQ9NZT2 677 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 GTF2IRD1Q9UHL9 959 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 AP4E1Q9UPM8 1137 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 NUB1Q9Y5A7 615 aa6.26□□□□□ -1.41
ECHDC1-206ENST00000417628 CNOT1A5YKK6 2376 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms