RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 CRYBB1P53674 252 aaPredicted RBP18.32■□□□□ 0.52
CALD1-204ENST00000417172 MRPS6P82932 125 aaKnown RBP18.32■□□□□ 0.52
CALD1-204ENST00000417172 CDC42EP1Q00587 391 aa18.32■□□□□ 0.52
CALD1-204ENST00000417172 ITGA7Q13683 1181 aa18.32■□□□□ 0.52
CALD1-204ENST00000417172 ARHGEF6Q15052 776 aa18.32■□□□□ 0.52
CALD1-204ENST00000417172 PTGISQ16647 500 aa18.32■□□□□ 0.52
CALD1-204ENST00000417172 SLC10A6Q3KNW5 377 aa18.32■□□□□ 0.52
CALD1-204ENST00000417172 NT5C1BQ96P26 610 aa18.32■□□□□ 0.52
CALD1-204ENST00000417172 CELF4Q9BZC1 486 aaKnown RBP18.32■□□□□ 0.52
CALD1-204ENST00000417172 UNC93B1Q9H1C4 597 aa18.32■□□□□ 0.52
CALD1-204ENST00000417172 APOBEC3GQ9HC16 384 aaKnown RBP18.32■□□□□ 0.52
CALD1-204ENST00000417172 ACP6Q9NPH0 428 aa18.32■□□□□ 0.52
CALD1-204ENST00000417172 PIN4Q9Y237 131 aaKnown RBP18.32■□□□□ 0.52
CALD1-204ENST00000417172 A0A087X0T9 212 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 SSU72P8A0A1W2PR75 194 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 CHRNA1P02708 482 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 CLTAP09496 248 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 FAM228BP0C875 321 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 JADE1Q6IE81 842 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 FAM228AQ86W67 206 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 NME8Q8N427 588 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 OLIG1Q8TAK6 271 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 ADPGKQ9BRR6 497 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.31■□□□□ 0.52
CALD1-204ENST00000417172 LACRTQ9GZZ8 138 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 RNF19AQ9NV58 838 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 ADAMTS1Q9UHI8 967 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 NOC2LQ9Y3T9 749 aaKnown RBP18.31■□□□□ 0.52
CALD1-204ENST00000417172 PHACTR2O75167 634 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 CLSTN1O94985 981 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 USP8P40818 1118 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 PRMT2P55345 433 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 NCOA4Q13772 614 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 HSP90AA2PQ14568 343 aaPredicted RBP18.31■□□□□ 0.52
CALD1-204ENST00000417172 SYT10Q6XYQ8 523 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 TRAPPC11Q7Z392 1133 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 SESTD1Q86VW0 696 aa18.31■□□□□ 0.52
CALD1-204ENST00000417172 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.31■□□□□ 0.52
CALD1-204ENST00000417172 NXF3Q9H4D5 531 aaKnown RBP18.31■□□□□ 0.52
CALD1-204ENST00000417172 PDCD11Q14690 1871 aaKnown RBP18.3■□□□□ 0.52
CALD1-204ENST00000417172 B4GALT4O60513 344 aa18.3■□□□□ 0.52
CALD1-204ENST00000417172 CALCAP01258 141 aa18.3■□□□□ 0.52
CALD1-204ENST00000417172 HSPA6P17066 643 aa18.3■□□□□ 0.52
CALD1-204ENST00000417172 RFX1P22670 979 aa18.3■□□□□ 0.52
CALD1-204ENST00000417172 PRKCIP41743 596 aa18.3■□□□□ 0.52
CALD1-204ENST00000417172 MTFR1Q15390 333 aa18.3■□□□□ 0.52
CALD1-204ENST00000417172 NOTUMQ6P988 496 aa18.3■□□□□ 0.52
CALD1-204ENST00000417172 SLC27A1Q6PCB7 646 aa18.3■□□□□ 0.52
CALD1-204ENST00000417172 SNTG2Q9NY99 539 aa18.3■□□□□ 0.52
CALD1-204ENST00000417172 DUSP10Q9Y6W6 482 aa18.3■□□□□ 0.52
CALD1-204ENST00000417172 A0A1W2PQ45 241 aaPredicted RBP18.29■□□□□ 0.52
CALD1-204ENST00000417172 A0A1W2PQY0 241 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 LCA5LO95447 670 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 TMEM191BP0C7N4 346 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 FERP16591 822 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 THPOP40225 353 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 GUCY2FP51841 1108 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 MYL6P60660 151 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 DUOXA2Q1HG44 320 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 KIAA1328Q86T90 577 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 SLC20A1Q8WUM9 679 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 WDR24Q96S15 920 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 APOL6Q9BWW8 343 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 IFIH1Q9BYX4 1025 aaKnown RBP18.29■□□□□ 0.52
CALD1-204ENST00000417172 C1orf112Q9NSG2 853 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 PTPN22Q9Y2R2 807 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 NUB1Q9Y5A7 615 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 PCDHA13Q9Y5I0 950 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 TRPV2Q9Y5S1 764 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 MROH7Q68CQ1 1323 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 MFAP3P55082 362 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 NOP14P78316 857 aaKnown RBP18.29■□□□□ 0.52
CALD1-204ENST00000417172 SPA17Q15506 151 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 ARHGAP29Q52LW3 1261 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 UBXN11Q5T124 520 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 SHC3Q92529 594 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 ACAP3Q96P50 834 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 SENP6Q9GZR1 1112 aaPredicted RBP18.29■□□□□ 0.52
CALD1-204ENST00000417172 WBP1LQ9NX94 342 aa18.29■□□□□ 0.52
CALD1-204ENST00000417172 M0QZ92 97 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 CYP26A1O43174 497 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 IL18RAPO95256 599 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 IPO7O95373 1038 aaKnown RBP18.28■□□□□ 0.52
CALD1-204ENST00000417172 GRM5P41594 1212 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 KRT83P78385 493 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 NCBP1Q09161 790 aaKnown RBP18.28■□□□□ 0.52
CALD1-204ENST00000417172 MGAT3Q09327 533 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 SURF1Q15526 300 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 SLC18A3Q16572 532 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 DCAF4L1Q3SXM0 396 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 WDR44Q5JSH3 913 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.28■□□□□ 0.52
CALD1-204ENST00000417172 LNX1Q8TBB1 728 aaPredicted RBP18.28■□□□□ 0.52
CALD1-204ENST00000417172 JAKMIP2Q96AA8 810 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 GLT1D1Q96MS3 346 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 PACSIN1Q9BY11 444 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 TRPV6Q9H1D0 765 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 GUCA1BQ9UMX6 200 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 MYH10P35580 1976 aa18.28■□□□□ 0.52
CALD1-204ENST00000417172 GOLGA6L9A6NEM1 432 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms