RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 FAM86C2PA6NEL3 165 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 HNRNPDLO14979 420 aaKnown RBP17.07■□□□□ 0.32
ITGB1-204ENST00000417122 SPTLC2O15270 562 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 MEFVO15553 781 aaPredicted RBP17.07■□□□□ 0.32
ITGB1-204ENST00000417122 PPP6R2O75170 966 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 ZSCAN22P10073 491 aaPredicted RBP17.07■□□□□ 0.32
ITGB1-204ENST00000417122 KCNE1P15382 129 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 RPL17P18621 184 aaKnown RBP17.07■□□□□ 0.32
ITGB1-204ENST00000417122 SP100P23497 879 aaPredicted RBP17.07■□□□□ 0.32
ITGB1-204ENST00000417122 NMT1P30419 496 aaKnown RBP17.07■□□□□ 0.32
ITGB1-204ENST00000417122 ABCD1P33897 745 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 STAT6P42226 847 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 SLC10A6Q3KNW5 377 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 HERC4Q5GLZ8 1057 aaPredicted RBP17.07■□□□□ 0.32
ITGB1-204ENST00000417122 ELMSAN1Q6PJG2 1045 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 GPR149Q86SP6 731 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 PALB2Q86YC2 1186 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 PIK3R5Q8WYR1 880 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 DDX12PQ92771 950 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 PANK2Q9BZ23 570 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 TSHZ2Q9NRE2 1034 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 NR2E1Q9Y466 385 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 VWA8A3KMH1 1905 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 BDP1A6H8Y1 2624 aa17.07■□□□□ 0.32
ITGB1-204ENST00000417122 C2orf16Q68DN1 1984 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 A0A087X0B3 334 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 MYMKA6NI61 221 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 TGM5O43548 720 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 YEATS4O95619 227 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 F13A1P00488 732 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 C1RP00736 705 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 PIGRP01833 764 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 SPATA31D3P0C874 917 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 IGFBP6P24592 240 aaPredicted RBP17.06■□□□□ 0.32
ITGB1-204ENST00000417122 GTF2BQ00403 316 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 PSMD5Q16401 504 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 CD300LGQ6UXG3 332 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.06■□□□□ 0.32
ITGB1-204ENST00000417122 C15orf39Q6ZRI6 1047 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 SPATA31D4Q6ZUB0 917 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 MAP4K3Q8IVH8 894 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 LNX1Q8TBB1 728 aaPredicted RBP17.06■□□□□ 0.32
ITGB1-204ENST00000417122 FEZF2Q8TBJ5 459 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 HDAC7Q8WUI4 952 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 DDX27Q96GQ7 796 aaKnown RBP17.06■□□□□ 0.32
ITGB1-204ENST00000417122 ST6GALNAC4Q9H4F1 302 aa17.06■□□□□ 0.32
ITGB1-204ENST00000417122 DENND4AQ7Z401 1863 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 CCDC195A0A1B0GUA6 201 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 PODXLO00592 558 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 TRAPPC3O43617 180 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 CLTAP09496 248 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 CXCL8P10145 99 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 MYBP10242 640 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 COL9A1P20849 921 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 KYAT1Q16773 422 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 FOXD4L6Q3SYB3 417 aaPredicted RBP17.05■□□□□ 0.32
ITGB1-204ENST00000417122 ZC2HC1CQ53FD0 456 aaPredicted RBP17.05■□□□□ 0.32
ITGB1-204ENST00000417122 PDXDC1Q6P996 788 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 LILRA6Q6PI73 481 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 FOXD4L3Q6VB84 417 aaPredicted RBP17.05■□□□□ 0.32
ITGB1-204ENST00000417122 SFR1Q86XK3 245 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 PDILTQ8N807 584 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 C3orf58Q8NDZ4 430 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 CMASQ8NFW8 434 aaPredicted RBP17.05■□□□□ 0.32
ITGB1-204ENST00000417122 C18orf25Q96B23 403 aaPredicted RBP17.05■□□□□ 0.32
ITGB1-204ENST00000417122 CLSTN3Q9BQT9 956 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 PLEKHA4Q9H4M7 779 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 PLEKHA5Q9HAU0 1116 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 SEL1LQ9UBV2 794 aa17.05■□□□□ 0.32
ITGB1-204ENST00000417122 C2CD4DB7Z1M9 353 aa17.04■□□□□ 0.32
ITGB1-204ENST00000417122 OGTO15294 1046 aa17.04■□□□□ 0.32
ITGB1-204ENST00000417122 FGFR3P22607 806 aa17.04■□□□□ 0.32
ITGB1-204ENST00000417122 RPL9P32969 192 aaKnown RBP17.04■□□□□ 0.32
ITGB1-204ENST00000417122 TNFSF9P41273 254 aa17.04■□□□□ 0.32
ITGB1-204ENST00000417122 BRCC3P46736 316 aa17.04■□□□□ 0.32
ITGB1-204ENST00000417122 PKP1Q13835 747 aa17.04■□□□□ 0.32
ITGB1-204ENST00000417122 SLC39A4Q6P5W5 647 aa17.04■□□□□ 0.32
ITGB1-204ENST00000417122 ZNF720Q7Z2F6 126 aa17.04■□□□□ 0.32
ITGB1-204ENST00000417122 DNAJC19Q96DA6 116 aa17.04■□□□□ 0.32
ITGB1-204ENST00000417122 A0A0B4J269 797 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 TTC26A0AVF1 554 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 PRR33A8MZF0 331 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 I3L4J1 428 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 FAM189A1O60320 539 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 CUTAO60888 179 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 RFPL2O75678 378 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 GAP43P17677 238 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 TKTP29401 623 aaKnown RBP17.03■□□□□ 0.32
ITGB1-204ENST00000417122 PPP2R3AQ06190 1150 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 ZBTB41Q5SVQ8 909 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 CYP26C1Q6V0L0 522 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 KREMEN2Q8NCW0 462 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 EDAQ92838 391 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 MSTO1Q9BUK6 570 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 MRPL44Q9H9J2 332 aaKnown RBP17.03■□□□□ 0.32
ITGB1-204ENST00000417122 TUBGCP4Q9UGJ1 667 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 USTQ9Y2C2 406 aa17.03■□□□□ 0.32
ITGB1-204ENST00000417122 ANKRD63C9JTQ0 380 aa17.02■□□□□ 0.32
ITGB1-204ENST00000417122 IDEP14735 1019 aa17.02■□□□□ 0.32
ITGB1-204ENST00000417122 SPAG1Q07617 926 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms