RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 CXCR5P32302 372 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 GALCP54803 685 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 H2AFVQ71UI9 128 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 FAM71AQ8IYT1 594 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 SHC3Q92529 594 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 UBXN4Q92575 508 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 SYT11Q9BT88 431 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 CDHR5Q9HBB8 845 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 PTPRHQ9HD43 1115 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 CPSF3Q9UKF6 684 aaKnown RBP11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 PACSIN2Q9UNF0 486 aaPredicted RBP11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 MYADML2A6NDP7 307 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 MMEP08473 750 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 FLT3LGP49771 235 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 FCGRTP55899 365 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 CAP1Q01518 475 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 TRIM32Q13049 653 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 NCOA4Q13772 614 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 AMHR2Q16671 573 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 RUFY4Q6ZNE9 571 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 TRAPPC11Q7Z392 1133 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 EPS8L1Q8TE68 723 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 TRIB2Q92519 343 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 APOBEC3GQ9HC16 384 aaKnown RBP11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 TNFSF13BQ9Y275 285 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 DAAM1Q9Y4D1 1078 aa11.49□□□□□ -0.57
SMPD4P1-201ENST00000416717 ERLIN2O94905 339 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 CYP2C9P11712 490 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 SSTR3P32745 418 aaPredicted RBP11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 PSEN2P49810 448 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 CPT1AP50416 773 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 LACTBP83111 547 aaPredicted RBP11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 C10orf76Q5T2E6 689 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 FMNL3Q8IVF7 1028 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 EFCAB13Q8IY85 973 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 RNF10Q8N5U6 811 aaKnown RBP11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 PDZD7Q9H5P4 517 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 CHORDC1Q9UHD1 332 aaPredicted RBP11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 NENFQ9UMX5 172 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 JRKLQ9Y4A0 524 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 NUB1Q9Y5A7 615 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 RRN3P2A6NIE6 340 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 TREHO43280 583 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 PGK1P00558 417 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 CHRNB2P17787 502 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 NOP14P78316 857 aaKnown RBP11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 PRKCZQ05513 592 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 FSCN1Q16658 493 aaKnown RBP11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 PAPD7Q5XG87 772 aaKnown RBP11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 SRGAP1Q7Z6B7 1085 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 DNAJB3Q8WWF6 145 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 PCDHB18PQ96TA0 734 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 OSMRQ99650 979 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 NFKBIZQ9BYH8 718 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 RPF1Q9H9Y2 349 aaKnown RBP11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 OSGEPQ9NPF4 335 aa11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 NOCTQ9UK39 431 aaKnown RBP11.48□□□□□ -0.57
SMPD4P1-201ENST00000416717 HTTP42858 3142 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 CEP350Q5VT06 3117 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 GRID2IPA4D2P6 1211 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 EFCAB8A8MWE9 144 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 TSPAN1O60635 241 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 TMEM191BP0C7N4 346 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 STAG3L1P0CL83 205 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 AKR1A1P14550 325 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 CYP11B1P15538 503 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 ANXA13P27216 316 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 PDE6CP51160 858 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 MYL6P60660 151 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 ENPEPQ07075 957 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 DUOXA2Q1HG44 320 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 GNASQ5JWF2 1037 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 WDR49Q8IV35 697 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 CEP112Q8N8E3 955 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 CAGE1Q8TC20 777 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 COG1Q8WTW3 980 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 VTI1AQ96AJ9 217 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 ARHGEF26Q96DR7 871 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 THAP2Q9H0W7 228 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 NRCAMQ92823 1304 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 ANO9A1A5B4 782 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 ZC3H11AO75152 810 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 FTLP02792 175 aaPredicted RBP11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 NFICP08651 508 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 KRT19P08727 400 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 GCNT1Q02742 428 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 POU5F1BQ06416 359 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 TRPC3Q13507 836 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 CUL2Q13617 745 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 WHAMMP3Q1A5X7 153 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 SCARA5Q6ZMJ2 495 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 CTNNBL1Q8WYA6 563 aaPredicted RBP11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 ANKRD7Q92527 254 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 CAPNS2Q96L46 248 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 MMS19Q96T76 1030 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 TLR10Q9BXR5 811 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 RNF216Q9NWF9 866 aaPredicted RBP11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 SMARCAL1Q9NZC9 954 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 EHD2Q9NZN4 543 aa11.47□□□□□ -0.57
SMPD4P1-201ENST00000416717 SNX12Q9UMY4 172 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms