RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 UNCXA6NJT0 531 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 PDE5AO76074 875 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 CCNB1P14635 433 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 EMP3P54852 163 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 ZNF844Q08AG5 666 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 DCTN2Q13561 401 aaKnown RBP21.7■■□□□ 1.06
AP1S3-205ENST00000415298 APTXQ7Z2E3 356 aaKnown RBP21.7■■□□□ 1.06
AP1S3-205ENST00000415298 MS4A4AQ96JQ5 239 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 CCDC42Q96M95 316 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 PTTG2Q9NZH5 202 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 SPECC1L-ADORA2AF8WAN1 911 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 PLA2G6O60733 806 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 LMNAP02545 664 aaKnown RBP21.69■■□□□ 1.06
AP1S3-205ENST00000415298 PRLRP16471 622 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 BMP6P22004 513 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 ZNF157P51786 506 aaPredicted RBP21.69■■□□□ 1.06
AP1S3-205ENST00000415298 NAPAP54920 295 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 TUBA1BP68363 451 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 TUBA1AQ71U36 451 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 FAM160B2Q86V87 743 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 DIS3L2Q8IYB7 885 aaKnown RBP21.69■■□□□ 1.06
AP1S3-205ENST00000415298 LRRC34Q8IZ02 419 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 CPXCR1Q8N123 301 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 PPP1R9AQ9ULJ8 1098 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 TDRKHQ9Y2W6 561 aaKnown RBP21.69■■□□□ 1.06
AP1S3-205ENST00000415298 PCDHA1Q9Y5I3 950 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 MATN2O00339 956 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 LYNP07948 512 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 MAGOHP61326 146 aaKnown RBP21.69■■□□□ 1.06
AP1S3-205ENST00000415298 KIF23Q02241 960 aaPredicted RBP21.69■■□□□ 1.06
AP1S3-205ENST00000415298 FAM209AQ5JX71 171 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 C6orf183Q5T699 404 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 SPRYD7Q5W111 196 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 MARK2Q7KZI7 788 aaKnown RBP21.69■■□□□ 1.06
AP1S3-205ENST00000415298 RETREG2Q8NC44 543 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 RASGRP4Q8TDF6 673 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 GIMAP1Q8WWP7 306 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 MAGOHBQ96A72 148 aaKnown RBP21.69■■□□□ 1.06
AP1S3-205ENST00000415298 TIMMDC1Q9NPL8 285 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 CLIC4Q9Y696 253 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 RLFQ13129 1914 aa21.69■■□□□ 1.06
AP1S3-205ENST00000415298 TTC34A8MYJ7 566 aa21.68■■□□□ 1.06
AP1S3-205ENST00000415298 ARFIP2P53365 341 aa21.68■■□□□ 1.06
AP1S3-205ENST00000415298 EARS2Q5JPH6 523 aaKnown RBP21.68■■□□□ 1.06
AP1S3-205ENST00000415298 TRIM67Q6ZTA4 783 aa21.68■■□□□ 1.06
AP1S3-205ENST00000415298 MAELQ96JY0 434 aaKnown RBP21.68■■□□□ 1.06
AP1S3-205ENST00000415298 EPB41L5Q9HCM4 733 aa21.68■■□□□ 1.06
AP1S3-205ENST00000415298 USP20Q9Y2K6 914 aa21.68■■□□□ 1.06
AP1S3-205ENST00000415298 GLI1P08151 1106 aa21.68■■□□□ 1.06
AP1S3-205ENST00000415298 TMED10P49755 219 aaKnown RBP21.68■■□□□ 1.06
AP1S3-205ENST00000415298 SNAPC2Q13487 334 aa21.68■■□□□ 1.06
AP1S3-205ENST00000415298 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.68■■□□□ 1.06
AP1S3-205ENST00000415298 LRRC8BQ6P9F7 803 aa21.68■■□□□ 1.06
AP1S3-205ENST00000415298 RIBC1Q8N443 379 aaPredicted RBP21.68■■□□□ 1.06
AP1S3-205ENST00000415298 UTP4Q969X6 686 aaKnown RBP21.68■■□□□ 1.06
AP1S3-205ENST00000415298 ZMAT5Q9UDW3 170 aaKnown RBP21.68■■□□□ 1.06
AP1S3-205ENST00000415298 ADD3Q9UEY8 706 aaKnown RBP21.68■■□□□ 1.06
AP1S3-205ENST00000415298 ABT1Q9ULW3 272 aaKnown RBP21.68■■□□□ 1.06
AP1S3-205ENST00000415298 TRIM33Q9UPN9 1127 aa21.68■■□□□ 1.06
AP1S3-205ENST00000415298 ZNF536O15090 1300 aa21.68■■□□□ 1.06
AP1S3-205ENST00000415298 SMCO2A6NFE2 343 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 A6NJR5 290 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 USP17L15C9J2P7 530 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 USP17L13C9JLJ4 530 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 USP17L11C9JVI0 530 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 USP17L18D6R9N7 530 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 USP17L22D6RA61 530 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 USP17L17D6RBQ6 530 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 USP17L19D6RCP7 530 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 USP17L20D6RJB6 530 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 TBCAO75347 108 aaKnown RBP21.67■■□□□ 1.06
AP1S3-205ENST00000415298 CPA3P15088 417 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 TXKP42681 527 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 USP17L24Q0WX57 530 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 COG2Q14746 738 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 WASHC2DQ5SRD0 308 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 GPAT2Q6NUI2 795 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.67■■□□□ 1.06
AP1S3-205ENST00000415298 RAVER2Q9HCJ3 691 aaKnown RBP21.67■■□□□ 1.06
AP1S3-205ENST00000415298 TRPC7Q9HCX4 862 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 PCDHA5Q9Y5H7 936 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 FAM205CA6NFA0 338 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 SHBGP04278 402 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 TUFMP49411 452 aaKnown RBP21.67■■□□□ 1.06
AP1S3-205ENST00000415298 RELAQ04206 551 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 SF3A3Q12874 501 aaKnown RBP eCLIP21.67■■□□□ 1.06
AP1S3-205ENST00000415298 FBXO11Q86XK2 927 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 DCLRE1BQ9H816 532 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 PNMA2Q9UL42 364 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 PARP14Q460N5 1801 aa21.67■■□□□ 1.06
AP1S3-205ENST00000415298 TRIM64CA6NLI5 447 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 VWA5AO00534 786 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 SNX3O60493 162 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 CDK4P11802 303 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 COL6A2P12110 1019 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 GM2AP17900 193 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 BDNFP23560 247 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 DSG3P32926 999 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 HSD17B3P37058 310 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 TMEM214Q6NUQ4 689 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms