RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 ZMAT2Q96NC0 199 aaKnown RBP10.47□□□□□ -0.73
RIF1-202ENST00000414861 TMEM39AQ9NV64 488 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 IMPACTQ9P2X3 320 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 TTC3P53804 2025 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 TRIM43BA6NCK2 446 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 MFAP3LO75121 409 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 GUCY2FP51841 1108 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 BIRC3Q13489 604 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 PLEKHG4Q58EX7 1191 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 ALKAL1Q6UXT8 129 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 TC2NQ8N9U0 490 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 DBF4BQ8NFT6 615 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 TRIM43Q96BQ3 446 aaPredicted RBP10.47□□□□□ -0.73
RIF1-202ENST00000414861 VWCEQ96DN2 955 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 PI4K2AQ9BTU6 479 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 PARP2Q9UGN5 583 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 COQ4Q9Y3A0 265 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 FHOD1Q9Y613 1164 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 P4HA2O15460 535 aa10.46□□□□□ -0.73
RIF1-202ENST00000414861 STX10O60499 249 aa10.46□□□□□ -0.73
RIF1-202ENST00000414861 AFF1P51825 1210 aaKnown RBP10.46□□□□□ -0.73
RIF1-202ENST00000414861 POU5F1Q01860 360 aaKnown RBP10.46□□□□□ -0.73
RIF1-202ENST00000414861 GPIHBP1Q8IV16 184 aa10.46□□□□□ -0.73
RIF1-202ENST00000414861 FBXL13Q8NEE6 735 aa10.46□□□□□ -0.73
RIF1-202ENST00000414861 ZFP42Q96MM3 310 aa10.46□□□□□ -0.73
RIF1-202ENST00000414861 TRAIPQ9BWF2 469 aa10.46□□□□□ -0.73
RIF1-202ENST00000414861 PLCB1Q9NQ66 1216 aa10.46□□□□□ -0.73
RIF1-202ENST00000414861 PRDM5Q9NQX1 630 aaPredicted RBP10.46□□□□□ -0.73
RIF1-202ENST00000414861 CNTN3Q9P232 1028 aa10.46□□□□□ -0.73
RIF1-202ENST00000414861 PLAGL2Q9UPG8 496 aa10.46□□□□□ -0.73
RIF1-202ENST00000414861 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.46□□□□□ -0.732e-17■□□□□ 9.3
RIF1-202ENST00000414861 LAMA2P24043 3122 aaKnown RBP10.46□□□□□ -0.73
RIF1-202ENST00000414861 TDRD15B5MCY1 1934 aaKnown RBP10.46□□□□□ -0.73
RIF1-202ENST00000414861 A0A0U1RQF3 1178 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 HLA-DRAP01903 254 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 TMEM191BP0C7N4 346 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 PIK3CAP42336 1068 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 YARSP54577 528 aaKnown RBP10.46□□□□□ -0.74
RIF1-202ENST00000414861 LRMPQ12912 555 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 TMEM132DQ14C87 1099 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 SURF1Q15526 300 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 FIGNQ5HY92 759 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 KLHDC7AQ5VTJ3 777 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 E4F1Q66K89 784 aaPredicted RBP10.46□□□□□ -0.74
RIF1-202ENST00000414861 AGMOQ6ZNB7 445 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 TRAPPC11Q7Z392 1133 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 DEFB128Q7Z7B8 93 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 PPFIBP1Q86W92 1011 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 ARHGEF19Q8IW93 802 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 C1orf127Q8N9H9 656 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 NEK11Q8NG66 645 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 CACTINQ8WUQ7 758 aaKnown RBP10.46□□□□□ -0.74
RIF1-202ENST00000414861 BAP1Q92560 729 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 KIF12Q96FN5 646 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 ZNF830Q96NB3 372 aaPredicted RBP10.46□□□□□ -0.74
RIF1-202ENST00000414861 KCNF1Q9H3M0 494 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 ASB7Q9H672 318 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 NLRC4Q9NPP4 1024 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 SIX4Q9UIU6 781 aa10.46□□□□□ -0.74
RIF1-202ENST00000414861 GOLGA6L6A8MZA4 724 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 C9IYK1 514 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 PTGESO14684 152 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 CXCL10P02778 98 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 UCHL3P15374 230 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 CAPN2P17655 700 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 MLH1P40692 756 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 POLR2FP61218 127 aaKnown RBP10.45□□□□□ -0.74
RIF1-202ENST00000414861 TRIM14Q14142 442 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 DUOXA2Q1HG44 320 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 PHLDB3Q6NSJ2 640 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 RNF169Q8NCN4 708 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 EHBP1Q8NDI1 1231 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 CXorf38Q8TB03 319 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 C18orf25Q96B23 403 aaPredicted RBP10.45□□□□□ -0.74
RIF1-202ENST00000414861 TSPYL2Q9H2G4 693 aaPredicted RBP10.45□□□□□ -0.74
RIF1-202ENST00000414861 PLEKHA5Q9HAU0 1116 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 RGS18Q9NS28 235 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 RAB20Q9NX57 234 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 TUBGCP4Q9UGJ1 667 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 CAPN11Q9UMQ6 739 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 C2CD2Q9Y426 696 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 LTBP2Q14767 1821 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 AKR1B15C9JRZ8 316 aaPredicted RBP10.45□□□□□ -0.74
RIF1-202ENST00000414861 ZNF623O75123 536 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 CST3P01034 146 aaPredicted RBP10.45□□□□□ -0.74
RIF1-202ENST00000414861 RAB27AP51159 221 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 NCOA4Q13772 614 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 XKR4Q5GH76 650 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 COL13A1Q5TAT6 717 aaPredicted RBP10.45□□□□□ -0.74
RIF1-202ENST00000414861 SPOPLQ6IQ16 392 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 MRPL10Q7Z7H8 261 aaKnown RBP10.45□□□□□ -0.74
RIF1-202ENST00000414861 ZNF598Q86UK7 904 aaKnown RBP10.45□□□□□ -0.74
RIF1-202ENST00000414861 ECHDC2Q86YB7 292 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 GSTCDQ8NEC7 633 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 KAT5Q92993 513 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 ANKRD36BP1Q96IX9 119 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 GAD1Q99259 594 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 NUP58Q9BVL2 599 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 CEP72Q9P209 647 aa10.45□□□□□ -0.74
RIF1-202ENST00000414861 APEX2Q9UBZ4 518 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms