RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 CYP3A5P20815 502 aa16■□□□□ 0.15
CHD1-202ENST00000414220 COL19A1Q14993 1142 aa16■□□□□ 0.15
CHD1-202ENST00000414220 CTC1Q2NKJ3 1217 aa16■□□□□ 0.15
CHD1-202ENST00000414220 ARMCX5Q6P1M9 558 aa16■□□□□ 0.15
CHD1-202ENST00000414220 KRBA2Q6ZNG9 492 aa16■□□□□ 0.15
CHD1-202ENST00000414220 ZNF507Q8TCN5 953 aa16■□□□□ 0.15
CHD1-202ENST00000414220 BCL7CQ8WUZ0 217 aaPredicted RBP16■□□□□ 0.15
CHD1-202ENST00000414220 KIF12Q96FN5 646 aa16■□□□□ 0.15
CHD1-202ENST00000414220 CPSF3Q9UKF6 684 aaKnown RBP16■□□□□ 0.15
CHD1-202ENST00000414220 NUB1Q9Y5A7 615 aa16■□□□□ 0.15
CHD1-202ENST00000414220 KIAA1671Q9BY89 1806 aa16■□□□□ 0.15
CHD1-202ENST00000414220 TTC26A0AVF1 554 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 TMEM189-UBE2V1I3L0A0 370 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 PODXLO00592 558 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 C2CD2LO14523 706 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 IL18RAPO95256 599 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 ADH1AP07327 375 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 PAX3P23760 479 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 KLRC2P26717 231 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 CLCNKBP51801 687 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 CASP5P51878 434 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 DSG1Q02413 1049 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 TFF2Q03403 129 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 PTPN14Q15678 1187 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 UPP1Q16831 310 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 SLC39A4Q6P5W5 647 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 BEST2Q8NFU1 509 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 GOLGA5Q8TBA6 731 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 HAPLN2Q9GZV7 340 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 KIAA1586Q9HCI6 787 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 CGNQ9P2M7 1197 aaKnown RBP15.99■□□□□ 0.15
CHD1-202ENST00000414220 DERAQ9Y315 318 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 PCDHGC5Q9Y5F6 944 aa15.99■□□□□ 0.15
CHD1-202ENST00000414220 CDH23Q9H251 3354 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 LACTBL1A8MY62 500 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 KIF4AO95239 1232 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 RPN1P04843 607 aaKnown RBP15.98■□□□□ 0.15
CHD1-202ENST00000414220 HOXB8P17481 243 aaPredicted RBP15.98■□□□□ 0.15
CHD1-202ENST00000414220 GTF2F1P35269 517 aaKnown RBP eCLIP15.98■□□□□ 0.15
CHD1-202ENST00000414220 TNFSF9P41273 254 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 ACOT2P49753 483 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 KCNA1Q09470 495 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 TMEM132DQ14C87 1099 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 SURF1Q15526 300 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 NAB2Q15742 525 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 ENOX2Q16206 610 aaKnown RBP15.98■□□□□ 0.15
CHD1-202ENST00000414220 FAM171A1Q5VUB5 890 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 TMEM184AQ6ZMB5 413 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 CEP57Q86XR8 500 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 NT5DC4Q86YG4 428 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 GRAMD1CQ8IYS0 662 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 NOC3LQ8WTT2 800 aaKnown RBP15.98■□□□□ 0.15
CHD1-202ENST00000414220 RABGGTAQ92696 567 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 TTPALQ9BTX7 342 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 GPR62Q9BZJ7 368 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 SLC39A2Q9NP94 309 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 CHST7Q9NS84 486 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 CD207Q9UJ71 328 aa15.98■□□□□ 0.15
CHD1-202ENST00000414220 R3HCC1Q9Y3T6 440 aaKnown RBP15.98■□□□□ 0.15
CHD1-202ENST00000414220 ARHGEF37A1IGU5 675 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 H3BQ06 376 aaPredicted RBP15.97■□□□□ 0.15
CHD1-202ENST00000414220 EXTL3O43909 919 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 CLASP2O75122 1294 aaKnown RBP15.97■□□□□ 0.15
CHD1-202ENST00000414220 CASP1P29466 404 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 FAM160A1Q05DH4 1040 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 KMT5BQ4FZB7 885 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 KIAA0319Q5VV43 1072 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 PTCRAQ6ISU1 281 aaPredicted RBP15.97■□□□□ 0.15
CHD1-202ENST00000414220 LLGL2Q6P1M3 1020 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.97■□□□□ 0.15
CHD1-202ENST00000414220 RNF168Q8IYW5 571 aaPredicted RBP15.97■□□□□ 0.15
CHD1-202ENST00000414220 GPD1LQ8N335 351 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 HASPINQ8TF76 798 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 CACTINQ8WUQ7 758 aaKnown RBP15.97■□□□□ 0.15
CHD1-202ENST00000414220 AUTS2Q8WXX7 1259 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 RIN2Q8WYP3 895 aaPredicted RBP15.97■□□□□ 0.15
CHD1-202ENST00000414220 HPS3Q969F9 1004 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 ZMAT2Q96NC0 199 aaKnown RBP15.97■□□□□ 0.15
CHD1-202ENST00000414220 KLHL5Q96PQ7 755 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 PAAF1Q9BRP4 392 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 FAM213AQ9BRX8 229 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 VN1R3Q9BXE9 311 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 CXCL16Q9H2A7 254 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 DZANK1Q9NVP4 752 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 RMND1Q9NWS8 449 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 C2CD2Q9Y426 696 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 TDRD15B5MCY1 1934 aaKnown RBP15.97■□□□□ 0.15
CHD1-202ENST00000414220 PLXNA4Q9HCM2 1894 aa15.97■□□□□ 0.15
CHD1-202ENST00000414220 TRANK1O15050 2925 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 ZNF233A6NK53 670 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 LINC01565O15544 149 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 FAM189A1O60320 539 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 SMC2O95347 1197 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 C1RP00736 705 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 ADRB2P07550 413 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 ADSSP30520 456 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 MCM4P33991 863 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 EHHADHQ08426 723 aa15.96■□□□□ 0.15
CHD1-202ENST00000414220 KNOP1Q1ED39 458 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms