RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 PDILTQ8N807 584 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 DDX12PQ92771 950 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 LRFN3Q9BTN0 628 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 TTPALQ9BTX7 342 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 IKZF4Q9H2S9 585 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 SFXN1Q9H9B4 322 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 CNTN3Q9P232 1028 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 RAPGEFL1Q9UHV5 662 aa28.76■■■□□ 2.19
VEGFA-207ENST00000413642 GLUD1P00367 558 aa28.75■■■□□ 2.19
VEGFA-207ENST00000413642 TNFSF9P41273 254 aa28.75■■■□□ 2.19
VEGFA-207ENST00000413642 BRCC3P46736 316 aa28.75■■■□□ 2.19
VEGFA-207ENST00000413642 SPAG1Q07617 926 aa28.75■■■□□ 2.19
VEGFA-207ENST00000413642 ATAT1Q5SQI0 421 aa28.75■■■□□ 2.19
VEGFA-207ENST00000413642 SLC39A4Q6P5W5 647 aa28.75■■■□□ 2.19
VEGFA-207ENST00000413642 LNX1Q8TBB1 728 aaPredicted RBP28.75■■■□□ 2.19
VEGFA-207ENST00000413642 DNAJC19Q96DA6 116 aa28.75■■■□□ 2.19
VEGFA-207ENST00000413642 TSHZ2Q9NRE2 1034 aa28.75■■■□□ 2.19
VEGFA-207ENST00000413642 HNRNPDLO14979 420 aaKnown RBP28.74■■■□□ 2.19
VEGFA-207ENST00000413642 PIGRP01833 764 aa28.74■■■□□ 2.19
VEGFA-207ENST00000413642 CXCL8P10145 99 aa28.74■■■□□ 2.19
VEGFA-207ENST00000413642 STAT6P42226 847 aa28.74■■■□□ 2.19
VEGFA-207ENST00000413642 MTHFRP42898 656 aa28.74■■■□□ 2.19
VEGFA-207ENST00000413642 GTF2BQ00403 316 aa28.74■■■□□ 2.19
VEGFA-207ENST00000413642 TMEM31Q5JXX7 168 aa28.74■■■□□ 2.19
VEGFA-207ENST00000413642 CCDC73Q6ZRK6 1079 aa28.74■■■□□ 2.19
VEGFA-207ENST00000413642 GPR149Q86SP6 731 aa28.74■■■□□ 2.19
VEGFA-207ENST00000413642 RIPOR3Q96MK2 946 aa28.74■■■□□ 2.19
VEGFA-207ENST00000413642 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.74■■■□□ 2.19
VEGFA-207ENST00000413642 FNIP2Q9P278 1114 aa28.74■■■□□ 2.19
VEGFA-207ENST00000413642 TISP43B9A030 160 aa28.73■■■□□ 2.19
VEGFA-207ENST00000413642 ANKRD63C9JTQ0 380 aa28.73■■■□□ 2.19
VEGFA-207ENST00000413642 TMEM189-UBE2V1I3L0A0 370 aa28.73■■■□□ 2.19
VEGFA-207ENST00000413642 ADAM12O43184 909 aa28.73■■■□□ 2.19
VEGFA-207ENST00000413642 TGM5O43548 720 aa28.73■■■□□ 2.19
VEGFA-207ENST00000413642 GPR65Q8IYL9 337 aa28.73■■■□□ 2.19
VEGFA-207ENST00000413642 PIK3R5Q8WYR1 880 aa28.73■■■□□ 2.19
VEGFA-207ENST00000413642 STAMQ92783 540 aa28.73■■■□□ 2.19
VEGFA-207ENST00000413642 UROC1Q96N76 676 aa28.73■■■□□ 2.19
VEGFA-207ENST00000413642 NECTIN4Q96NY8 510 aa28.73■■■□□ 2.19
VEGFA-207ENST00000413642 CLSTN3Q9BQT9 956 aa28.73■■■□□ 2.19
VEGFA-207ENST00000413642 TBC1D7Q9P0N9 293 aa28.73■■■□□ 2.19
VEGFA-207ENST00000413642 PODXLO00592 558 aa28.72■■■□□ 2.19
VEGFA-207ENST00000413642 GPR37L1O60883 481 aa28.72■■■□□ 2.19
VEGFA-207ENST00000413642 PPP6R2O75170 966 aa28.72■■■□□ 2.19
VEGFA-207ENST00000413642 RFPL2O75678 378 aa28.72■■■□□ 2.19
VEGFA-207ENST00000413642 YEATS4O95619 227 aa28.72■■■□□ 2.19
VEGFA-207ENST00000413642 CLTAP09496 248 aa28.72■■■□□ 2.19
VEGFA-207ENST00000413642 PSMD5Q16401 504 aa28.72■■■□□ 2.19
VEGFA-207ENST00000413642 HERC4Q5GLZ8 1057 aaPredicted RBP28.72■■■□□ 2.19
VEGFA-207ENST00000413642 LILRA6Q6PI73 481 aa28.72■■■□□ 2.19
VEGFA-207ENST00000413642 MAP4K3Q8IVH8 894 aa28.72■■■□□ 2.19
VEGFA-207ENST00000413642 SLC38A7Q9NVC3 462 aa28.72■■■□□ 2.19
VEGFA-207ENST00000413642 TUBGCP4Q9UGJ1 667 aa28.72■■■□□ 2.19
VEGFA-207ENST00000413642 C2CD4DB7Z1M9 353 aa28.71■■■□□ 2.19
VEGFA-207ENST00000413642 FAM189A1O60320 539 aa28.71■■■□□ 2.19
VEGFA-207ENST00000413642 COL9A1P20849 921 aa28.71■■■□□ 2.19
VEGFA-207ENST00000413642 FGFR3P22607 806 aa28.71■■■□□ 2.19
VEGFA-207ENST00000413642 TKTP29401 623 aaKnown RBP28.71■■■□□ 2.19
VEGFA-207ENST00000413642 ELAVL2Q12926 359 aaKnown RBP28.71■■■□□ 2.19
VEGFA-207ENST00000413642 SHC4Q6S5L8 630 aa28.71■■■□□ 2.19
VEGFA-207ENST00000413642 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.71■■■□□ 2.19
VEGFA-207ENST00000413642 ZNF720Q7Z2F6 126 aa28.71■■■□□ 2.19
VEGFA-207ENST00000413642 A0A0B4J269 797 aa28.7■■■□□ 2.18
VEGFA-207ENST00000413642 DDX27Q96GQ7 796 aaKnown RBP28.7■■■□□ 2.18
VEGFA-207ENST00000413642 MSTO1Q9BUK6 570 aa28.7■■■□□ 2.18
VEGFA-207ENST00000413642 ST6GALNAC4Q9H4F1 302 aa28.7■■■□□ 2.18
VEGFA-207ENST00000413642 C5orf42Q9H799 3197 aa28.7■■■□□ 2.18
VEGFA-207ENST00000413642 CCDC195A0A1B0GUA6 201 aa28.69■■■□□ 2.18
VEGFA-207ENST00000413642 TTC26A0AVF1 554 aa28.69■■■□□ 2.18
VEGFA-207ENST00000413642 LACTBL1A8MY62 500 aa28.69■■■□□ 2.18
VEGFA-207ENST00000413642 IDEP14735 1019 aa28.69■■■□□ 2.18
VEGFA-207ENST00000413642 KCNA1Q09470 495 aa28.69■■■□□ 2.18
VEGFA-207ENST00000413642 AXDND1Q5T1B0 1012 aaPredicted RBP28.69■■■□□ 2.18
VEGFA-207ENST00000413642 RSPO2Q6UXX9 243 aaPredicted RBP28.69■■■□□ 2.18
VEGFA-207ENST00000413642 FGFBP2Q9BYJ0 223 aa28.69■■■□□ 2.18
VEGFA-207ENST00000413642 OGTO15294 1046 aa28.68■■■□□ 2.18
VEGFA-207ENST00000413642 CUTAO60888 179 aa28.68■■■□□ 2.18
VEGFA-207ENST00000413642 SCP2P22307 547 aa28.68■■■□□ 2.18
VEGFA-207ENST00000413642 CREMQ03060 361 aa28.68■■■□□ 2.18
VEGFA-207ENST00000413642 ENOX2Q16206 610 aaKnown RBP28.68■■■□□ 2.18
VEGFA-207ENST00000413642 E2F4Q16254 413 aa28.68■■■□□ 2.18
VEGFA-207ENST00000413642 KREMEN2Q8NCW0 462 aa28.68■■■□□ 2.18
VEGFA-207ENST00000413642 CMASQ8NFW8 434 aaPredicted RBP28.68■■■□□ 2.18
VEGFA-207ENST00000413642 ZNF707Q96C28 371 aaPredicted RBP28.68■■■□□ 2.18
VEGFA-207ENST00000413642 CHAMP1Q96JM3 812 aa28.68■■■□□ 2.18
VEGFA-207ENST00000413642 STRA6Q9BX79 667 aa28.68■■■□□ 2.18
VEGFA-207ENST00000413642 MRPL44Q9H9J2 332 aaKnown RBP28.68■■■□□ 2.18
VEGFA-207ENST00000413642 PPP1R37O75864 691 aa28.67■■■□□ 2.18
VEGFA-207ENST00000413642 PDIA4P13667 645 aaKnown RBP28.67■■■□□ 2.18
VEGFA-207ENST00000413642 GUCY2FP51841 1108 aa28.67■■■□□ 2.18
VEGFA-207ENST00000413642 CASP5P51878 434 aa28.67■■■□□ 2.18
VEGFA-207ENST00000413642 DNM1Q05193 864 aaKnown RBP28.67■■■□□ 2.18
VEGFA-207ENST00000413642 DHX58Q96C10 678 aa28.67■■■□□ 2.18
VEGFA-207ENST00000413642 KIF12Q96FN5 646 aa28.67■■■□□ 2.18
VEGFA-207ENST00000413642 PLEKHA5Q9HAU0 1116 aa28.67■■■□□ 2.18
VEGFA-207ENST00000413642 NR2E1Q9Y466 385 aa28.67■■■□□ 2.18
VEGFA-207ENST00000413642 MYH11P35749 1972 aa28.67■■■□□ 2.18
VEGFA-207ENST00000413642 GAP43P17677 238 aa28.66■■■□□ 2.18
VEGFA-207ENST00000413642 RPL9P32969 192 aaKnown RBP28.66■■■□□ 2.18
VEGFA-207ENST00000413642 OR1D2P34982 312 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms