RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 GTPBP10A4D1E9 387 aaKnown RBP18.57■□□□□ 0.56
PTPRC-206ENST00000413409 ATP9AO75110 1047 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 AKAP3O75969 853 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 URI1O94763 535 aaPredicted RBP18.57■□□□□ 0.56
PTPRC-206ENST00000413409 LCA5LO95447 670 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 CTSHP09668 335 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 SNRPFP62306 86 aaKnown RBP18.57■□□□□ 0.56
PTPRC-206ENST00000413409 KCNH2Q12809 1159 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 UGCGQ16739 394 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 CACNA2D4Q7Z3S7 1137 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 C12orf56Q8IXR9 622 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 TMEM105Q8N8V8 129 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 TSC1Q92574 1164 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 TSGA10Q9BZW7 698 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 GBP3Q9H0R5 595 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 GANQ9H2C0 597 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 DMAC2Q9NW81 257 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 KIAA1217Q5T5P2 1943 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 ADGRA3Q8IWK6 1321 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 LRRC53A6NM62 1247 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 SFI1A8K8P3 1242 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 TREHO43280 583 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 NOL4O94818 638 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 PLS3P13797 630 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 HOXC8P31273 242 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 PSMC2P35998 433 aaKnown RBP18.56■□□□□ 0.56
PTPRC-206ENST00000413409 NRIP1P48552 1158 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 RBM10P98175 930 aaKnown RBP18.56■□□□□ 0.56
PTPRC-206ENST00000413409 TXLNBQ8N3L3 684 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 SPPL3Q8TCT6 385 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 ATP6V0A1Q93050 837 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 HVCN1Q96D96 273 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 BORCS6Q96GS4 357 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 BCAS3Q9H6U6 928 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 TMEM206Q9H813 350 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 AGPAT3Q9NRZ7 376 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 FBXL5Q9UKA1 691 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 MYO6Q9UM54 1294 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 RWDD3Q9Y3V2 267 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 DAAM1Q9Y4D1 1078 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 PCDHGC5Q9Y5F6 944 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 PCDHA10Q9Y5I2 948 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 WDR81Q562E7 1941 aa18.56■□□□□ 0.56
PTPRC-206ENST00000413409 SPATA31C2B4DYI2 1134 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 K7ENM7 598 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 SORBS3O60504 671 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 ITGB1P05556 798 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 VAV2P52735 878 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 LAMC2Q13753 1193 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 RRAGAQ7L523 313 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 KIAA1328Q86T90 577 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 RBM23Q86U06 439 aaKnown RBP18.55■□□□□ 0.56
PTPRC-206ENST00000413409 FAM186BQ8IYM0 893 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 SUSD6Q92537 303 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 NKD2Q969F2 451 aaPredicted RBP18.55■□□□□ 0.56
PTPRC-206ENST00000413409 SLC35C1Q96A29 364 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 ZNF689Q96CS4 500 aaPredicted RBP18.55■□□□□ 0.56
PTPRC-206ENST00000413409 CCDC42Q96M95 316 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 C16orf70Q9BSU1 422 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 ARHGAP20Q9P2F6 1191 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 FRYLO94915 3013 aa18.55■□□□□ 0.56
PTPRC-206ENST00000413409 A0A0U1RQJ8 604 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 CTAGE9A4FU28 777 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 BACH1O14867 736 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 KRT86O43790 486 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 USO1O60763 962 aaKnown RBP18.54■□□□□ 0.56
PTPRC-206ENST00000413409 PPFIA4O75335 1185 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 PSAPP07602 524 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 KCNA1Q09470 495 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 PPP2R5AQ15172 486 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 SPA17Q15506 151 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 STXBP2Q15833 593 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 HSDL1Q3SXM5 330 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 ZC2HC1CQ53FD0 456 aaPredicted RBP18.54■□□□□ 0.56
PTPRC-206ENST00000413409 ZNF569Q5MCW4 686 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 MNS1Q8NEH6 495 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 ATRIPQ8WXE1 791 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 JAKMIP2Q96AA8 810 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 ACCSQ96QU6 501 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 NAPGQ99747 312 aaPredicted RBP18.54■□□□□ 0.56
PTPRC-206ENST00000413409 PLVAPQ9BX97 442 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 JPH1Q9HDC5 661 aaPredicted RBP18.54■□□□□ 0.56
PTPRC-206ENST00000413409 IGSF9BQ9UPX0 1349 aa18.54■□□□□ 0.56
PTPRC-206ENST00000413409 C17orf102A2RUQ5 167 aa18.53■□□□□ 0.56
PTPRC-206ENST00000413409 TADA3O75528 432 aa18.53■□□□□ 0.56
PTPRC-206ENST00000413409 SERPING1P05155 500 aa18.53■□□□□ 0.56
PTPRC-206ENST00000413409 ATF7P17544 494 aaPredicted RBP18.53■□□□□ 0.56
PTPRC-206ENST00000413409 KIF11P52732 1056 aa18.53■□□□□ 0.56
PTPRC-206ENST00000413409 NCKAP1LP55160 1127 aa18.53■□□□□ 0.56
PTPRC-206ENST00000413409 EXOC3L4Q17RC7 722 aa18.53■□□□□ 0.56
PTPRC-206ENST00000413409 SFMBT2Q5VUG0 894 aa18.53■□□□□ 0.56
PTPRC-206ENST00000413409 OTUD6AQ7L8S5 288 aa18.53■□□□□ 0.56
PTPRC-206ENST00000413409 SLC35F6Q8N357 371 aa18.53■□□□□ 0.56
PTPRC-206ENST00000413409 VN1R2Q8NFZ6 395 aa18.53■□□□□ 0.56
PTPRC-206ENST00000413409 APBB2Q92870 758 aa18.53■□□□□ 0.56
PTPRC-206ENST00000413409 RMDN1Q96DB5 314 aa18.53■□□□□ 0.56
PTPRC-206ENST00000413409 IRX2Q9BZI1 471 aaPredicted RBP18.53■□□□□ 0.56
PTPRC-206ENST00000413409 C17orf75Q9HAS0 396 aa18.53■□□□□ 0.56
PTPRC-206ENST00000413409 SLC9A2Q9UBY0 812 aa18.53■□□□□ 0.56
PTPRC-206ENST00000413409 EFCAB8A8MWE9 144 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms