RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 PMS2P54278 862 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 KRT71Q3SY84 523 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 TTC27Q6P3X3 843 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 B4GALNT4Q76KP1 1039 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 CCDC105Q8IYK2 499 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 MCOLN2Q8IZK6 566 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 ANKRD35Q8N283 1001 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 FBXO25Q8TCJ0 367 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 RASSF4Q9H2L5 321 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 PABPC3Q9H361 631 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 ANAPC7Q9UJX3 599 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 TRIM66O15016 1216 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 NUDT17P0C025 328 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 RARAP10276 462 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 ARL2P36404 184 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 PIK3CAP42336 1068 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 SLC1A1P43005 524 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 ACOT2P49753 483 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 NLRP11P59045 1033 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 PTGISQ16647 500 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 SH3D19Q5HYK7 790 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 HOOK3Q86VS8 718 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 C12orf50Q8NA57 414 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 NIFKQ9BYG3 293 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 MTFR1LQ9H019 292 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 GRHL1Q9NZI5 618 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 NOVA2Q9UNW9 492 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 LRRIQ4A6NIV6 560 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 GLRA2P23416 452 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 NSFP46459 744 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 RPL21P46778 160 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 TDRD10Q5VZ19 366 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 LMBRD2Q68DH5 695 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 SEPT14Q6ZU15 432 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 CPNE8Q86YQ8 564 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 ASAP3Q8TDY4 903 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 FAM129AQ9BZQ8 928 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 LRRC19Q9H756 370 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 RBAKQ9NYW8 714 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 ARID2Q68CP9 1835 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 KIAA1217Q5T5P2 1943 aa12.28□□□□□ -0.44
TRAFD1-202ENST00000412615 PASKQ96RG2 1323 aa12.27□□□□□ -0.44
TRAFD1-202ENST00000412615 ZNF541Q9H0D2 1346 aa12.27□□□□□ -0.44
TRAFD1-202ENST00000412615 FSCN2O14926 492 aa12.27□□□□□ -0.44
TRAFD1-202ENST00000412615 PPP2R2AP63151 447 aa12.27□□□□□ -0.44
TRAFD1-202ENST00000412615 DENND2CQ68D51 928 aa12.27□□□□□ -0.44
TRAFD1-202ENST00000412615 SPATS2Q86XZ4 545 aaKnown RBP12.27□□□□□ -0.44
TRAFD1-202ENST00000412615 MAIP1Q8WWC4 291 aa12.27□□□□□ -0.44
TRAFD1-202ENST00000412615 CEP89Q96ST8 783 aa12.27□□□□□ -0.44
TRAFD1-202ENST00000412615 NRBP2Q9NSY0 501 aa12.27□□□□□ -0.44
TRAFD1-202ENST00000412615 GGA3Q9NZ52 723 aa12.27□□□□□ -0.44
TRAFD1-202ENST00000412615 FBXO40Q9UH90 709 aa12.27□□□□□ -0.44
TRAFD1-202ENST00000412615 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.27□□□□□ -0.44
TRAFD1-202ENST00000412615 IGKV6D-21A0A0A0MT36 114 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 TCRBV7S2A1N4TA0A589 114 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 CYP1A1P04798 512 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 POTEJP0CG39 1038 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 RFC5P40937 340 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 MAGEA9P43362 315 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 CNTN2Q02246 1040 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 CENPCQ03188 943 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 CUL2Q13617 745 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 SIX1Q15475 284 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 CRELD2Q6UXH1 353 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 TRIM72Q6ZMU5 477 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 CROCCP2Q86T23 111 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 TRPM4Q8TD43 1214 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 ZNF526Q8TF50 670 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 CPA5Q8WXQ8 436 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 TMEM134Q9H6X4 195 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 SLC12A6Q9UHW9 1150 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 WDR81Q562E7 1941 aa12.27□□□□□ -0.45
TRAFD1-202ENST00000412615 ECEL1O95672 775 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 CALCAP01258 141 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 RRM1P23921 792 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 ALDH5A1P51649 535 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 CDR1P51861 262 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 SLMAPQ14BN4 828 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 LIN9Q5TKA1 542 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.26□□□□□ -0.457e-10■■■■■ 45.9
TRAFD1-202ENST00000412615 SLCO2A1Q92959 643 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 FAM84AQ96KN4 292 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 MSTO1Q9BUK6 570 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 TARS2Q9BW92 718 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 GPRC5DQ9NZD1 345 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 CD2APQ9Y5K6 639 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 FAM169AQ9Y6X4 670 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 MROH7Q68CQ1 1323 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 A0A0B4J269 797 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 CLDN3O15551 220 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 VNN1O95497 513 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 ACO1P21399 889 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 TBXAS1P24557 533 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 WNT7BP56706 349 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 MAGOHP61326 146 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 PPP1R2P3Q6NXS1 205 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 LBX2Q6XYB7 198 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 NLRP14Q86W24 1093 aa12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 ZBTB45Q96K62 511 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-202ENST00000412615 CGRRF1Q99675 332 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms