RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 ERGIC2Q96RQ1 377 aa10.48□□□□□ -0.73
SMPD4-203ENST00000412570 IMPG2Q9BZV3 1241 aa10.48□□□□□ -0.73
SMPD4-203ENST00000412570 EHD2Q9NZN4 543 aa10.48□□□□□ -0.73
SMPD4-203ENST00000412570 GRIN2DO15399 1336 aa10.48□□□□□ -0.73
SMPD4-203ENST00000412570 F8W810 466 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 SLC26A2P50443 739 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 EFNA5P52803 228 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 LRRN4CLQ8ND94 238 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 BAP1Q92560 729 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 GAD1Q99259 594 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 JPH2Q9BR39 696 aaPredicted RBP10.47□□□□□ -0.73
SMPD4-203ENST00000412570 FAM49BQ9NUQ9 324 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 DMAC2Q9NW81 257 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 PLAGL2Q9UPG8 496 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 NUB1Q9Y5A7 615 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 OGTO15294 1046 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 STX10O60499 249 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 RECQL4O94761 1208 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 TNFAIP3P21580 790 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 MAP2K2P36507 400 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 MLH1P40692 756 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 NUMBP49757 651 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 CT47A1Q5JQC4 288 aaPredicted RBP10.47□□□□□ -0.73
SMPD4-203ENST00000412570 ZNF618Q5T7W0 954 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 TRAPPC11Q7Z392 1133 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 ACAP3Q96P50 834 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 STRA6Q9BX79 667 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 HCSTQ9UBK5 93 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 APEX2Q9UBZ4 518 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 SNX9Q9Y5X1 595 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 TMTC1Q8IUR5 882 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 EHBP1Q8NDI1 1231 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 KREMEN1Q96MU8 473 aa10.47□□□□□ -0.73
SMPD4-203ENST00000412570 NTPCRQ9BSD7 190 aaKnown RBP10.47□□□□□ -0.73
SMPD4-203ENST00000412570 PHLPP2Q6ZVD8 1323 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 KBTBD13C9JR72 458 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 MMEP08473 750 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 ACAT1P24752 427 aaKnown RBP10.46□□□□□ -0.73
SMPD4-203ENST00000412570 CYLC1P35663 651 aaPredicted RBP10.46□□□□□ -0.73
SMPD4-203ENST00000412570 NOP14P78316 857 aaKnown RBP10.46□□□□□ -0.73
SMPD4-203ENST00000412570 ZNF699Q32M78 642 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 RPUSD2Q8IZ73 545 aaKnown RBP10.46□□□□□ -0.73
SMPD4-203ENST00000412570 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.46□□□□□ -0.731e-6■■■■■ 32
SMPD4-203ENST00000412570 APOBEC3GQ9HC16 384 aaKnown RBP10.46□□□□□ -0.73
SMPD4-203ENST00000412570 SIX2Q9NPC8 291 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 PRMT7Q9NVM4 692 aaPredicted RBP10.46□□□□□ -0.73
SMPD4-203ENST00000412570 CEP72Q9P209 647 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 REXO2Q9Y3B8 237 aaKnown RBP10.46□□□□□ -0.73
SMPD4-203ENST00000412570 SZT2Q5T011 3432 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 A0A1W2PQC6 194 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 RBM47A0AV96 593 aaKnown RBP10.46□□□□□ -0.73
SMPD4-203ENST00000412570 NT5C1B-RDH14C9J2C7 533 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 SLC16A3O15427 465 aaKnown RBP10.46□□□□□ -0.73
SMPD4-203ENST00000412570 B4GALT4O60513 344 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 TNNC2P02585 160 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 BRD2P25440 801 aaKnown RBP10.46□□□□□ -0.73
SMPD4-203ENST00000412570 GATMP50440 423 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 SLFN12LQ6IEE8 588 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 BORCS6Q96GS4 357 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 PAAF1Q9BRP4 392 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 C2orf40Q9H1Z8 148 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 GANQ9H2C0 597 aa10.46□□□□□ -0.73
SMPD4-203ENST00000412570 PRG3Q9Y2Y8 225 aaPredicted RBP10.46□□□□□ -0.73
SMPD4-203ENST00000412570 ZSCAN12O43309 604 aa10.46□□□□□ -0.74
SMPD4-203ENST00000412570 THAP12O43422 761 aa10.46□□□□□ -0.74
SMPD4-203ENST00000412570 ADAMTS4O75173 837 aa10.46□□□□□ -0.74
SMPD4-203ENST00000412570 CHRNA1P02708 482 aa10.46□□□□□ -0.74
SMPD4-203ENST00000412570 CPNE8Q86YQ8 564 aa10.46□□□□□ -0.74
SMPD4-203ENST00000412570 CCDC112Q8NEF3 446 aa10.46□□□□□ -0.74
SMPD4-203ENST00000412570 ZMAT2Q96NC0 199 aaKnown RBP10.46□□□□□ -0.74
SMPD4-203ENST00000412570 ADAM2Q99965 735 aa10.46□□□□□ -0.74
SMPD4-203ENST00000412570 NUP58Q9BVL2 599 aa10.46□□□□□ -0.74
SMPD4-203ENST00000412570 C17orf75Q9HAS0 396 aa10.46□□□□□ -0.74
SMPD4-203ENST00000412570 HMGXB4Q9UGU5 601 aa10.46□□□□□ -0.74
SMPD4-203ENST00000412570 RRN3P2A6NIE6 340 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 RIOK3O14730 519 aaKnown RBP10.45□□□□□ -0.74
SMPD4-203ENST00000412570 VNN1O95497 513 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 CCL5P13501 91 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 CYP2C18P33260 490 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 YARSP54577 528 aaKnown RBP10.45□□□□□ -0.74
SMPD4-203ENST00000412570 C1QTNF8P60827 252 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 ALCAMQ13740 583 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 SLC10A6Q3KNW5 377 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 REXO1L1PQ8IX06 675 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 ARRDC4Q8NCT1 418 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 PANX2Q96RD6 677 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 CCDC94Q9BW85 323 aaPredicted RBP10.45□□□□□ -0.74
SMPD4-203ENST00000412570 CELF4Q9BZC1 486 aaKnown RBP10.45□□□□□ -0.74
SMPD4-203ENST00000412570 SMYD3Q9H7B4 428 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 USTQ9Y2C2 406 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 PCDHA13Q9Y5I0 950 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 IGKV6-21A0A0C4DH24 114 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 A0A1W2PQ45 241 aaPredicted RBP10.45□□□□□ -0.74
SMPD4-203ENST00000412570 A0A1W2PQY0 241 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 F8VZ95 297 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 GOLGA8SH3BPF8 625 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 ZNF185O15231 689 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 KIF5CO60282 957 aa10.45□□□□□ -0.74
SMPD4-203ENST00000412570 DARSP14868 501 aaKnown RBP10.45□□□□□ -0.74
SMPD4-203ENST00000412570 ZSCAN20P17040 1043 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms