RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ADGRF4Q8IZF3 695 aa6.06□□□□□ -1.44
LINC00342-201ENST00000412393 MORC4Q8TE76 937 aa6.06□□□□□ -1.44
LINC00342-201ENST00000412393 GLT1D1Q96MS3 346 aa6.06□□□□□ -1.44
LINC00342-201ENST00000412393 MPHOSPH6Q99547 160 aaKnown RBP6.06□□□□□ -1.44
LINC00342-201ENST00000412393 GTPBP4Q9BZE4 634 aaKnown RBP6.06□□□□□ -1.44
LINC00342-201ENST00000412393 AP5M1Q9H0R1 490 aa6.06□□□□□ -1.44
LINC00342-201ENST00000412393 GZF1Q9H116 711 aaPredicted RBP6.06□□□□□ -1.44
LINC00342-201ENST00000412393 VAT1LQ9HCJ6 419 aa6.06□□□□□ -1.44
LINC00342-201ENST00000412393 VTA1Q9NP79 307 aa6.06□□□□□ -1.44
LINC00342-201ENST00000412393 PDGFCQ9NRA1 345 aa6.06□□□□□ -1.44
LINC00342-201ENST00000412393 LMBRD1Q9NUN5 540 aa6.06□□□□□ -1.44
LINC00342-201ENST00000412393 MYO9BQ13459 2157 aa6.06□□□□□ -1.44
LINC00342-201ENST00000412393 ELP1O95163 1332 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 ABCB11O95342 1321 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 ERICH2A1L162 156 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 TRIM43BA6NCK2 446 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 B4DLN1 442 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 KLRF2D3W0D1 207 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 E7EWF7 191 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 ARVCFO00192 962 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 IFIT3O14879 490 aaKnown RBP6.05□□□□□ -1.44
LINC00342-201ENST00000412393 KIAA0355O15063 1070 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 CTAGE5O15320 804 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 KIF20AO95235 890 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 RAG1P15918 1043 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 ENDOUP21128 410 aaKnown RBP6.05□□□□□ -1.44
LINC00342-201ENST00000412393 RPL10P27635 214 aaKnown RBP6.05□□□□□ -1.44
LINC00342-201ENST00000412393 GALK1P51570 392 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 MRPL12P52815 198 aaKnown RBP6.05□□□□□ -1.44
LINC00342-201ENST00000412393 NKX3-2P78367 333 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 BEX3Q00994 111 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 SEPT6Q14141 434 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 FSCN1Q16658 493 aaKnown RBP6.05□□□□□ -1.44
LINC00342-201ENST00000412393 QRICH1Q2TAL8 776 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 LRIT3Q3SXY7 679 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 SASS6Q6UVJ0 657 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 ANKRD33Q7Z3H0 272 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 TLK2Q86UE8 772 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 DAGLBQ8NCG7 672 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 RGS22Q8NE09 1264 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 FAM13CQ8NE31 585 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 DNERQ8NFT8 737 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 NCOA7Q8NI08 942 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 TBC1D5Q92609 795 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 MAP4K1Q92918 833 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 BADQ92934 168 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 TRIM43Q96BQ3 446 aaPredicted RBP6.05□□□□□ -1.44
LINC00342-201ENST00000412393 JMJD4Q9H9V9 463 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 GNEQ9Y223 722 aaKnown RBP6.05□□□□□ -1.44
LINC00342-201ENST00000412393 PCDHA5Q9Y5H7 936 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 RBM8AQ9Y5S9 174 aaKnown RBP6.05□□□□□ -1.44
LINC00342-201ENST00000412393 TAF6LQ9Y6J9 622 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 SCN10AQ9Y5Y9 1956 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 GBF1Q92538 1859 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 DOCK5Q9H7D0 1870 aa6.05□□□□□ -1.44
LINC00342-201ENST00000412393 KAT6AQ92794 2004 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 MROH7Q68CQ1 1323 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 A0A0U1RQG5 324 aaPredicted RBP6.04□□□□□ -1.44
LINC00342-201ENST00000412393 TLR3O15455 904 aaKnown RBP6.04□□□□□ -1.44
LINC00342-201ENST00000412393 ZEB2O60315 1214 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 CABYRO75952 493 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 MBD3O95983 291 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 TNFRSF1AP19438 455 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 PTGS1P23219 599 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 EDNRBP24530 442 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 ITGB8P26012 769 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 CDK7P50613 346 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 PCBP3P57721 371 aaKnown RBP6.04□□□□□ -1.44
LINC00342-201ENST00000412393 FAM193AP78312 1265 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 ZXDAP98168 799 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 GRM4Q14833 912 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 WTAPQ15007 396 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 SART3Q15020 963 aaKnown RBP6.04□□□□□ -1.44
LINC00342-201ENST00000412393 SHHQ15465 462 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 CCDC85BQ15834 202 aaPredicted RBP6.04□□□□□ -1.44
LINC00342-201ENST00000412393 DUSP28Q4G0W2 176 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 UBXN11Q5T124 520 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 TMEM63BQ5T3F8 832 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 GALNT18Q6P9A2 607 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 LRSAM1Q6UWE0 723 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 CXCL17Q6UXB2 119 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 STOX1Q6ZVD7 989 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 CHST3Q7LGC8 479 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 MCF2L2Q86YR7 1114 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 ZNF655Q8N720 491 aaPredicted RBP6.04□□□□□ -1.44
LINC00342-201ENST00000412393 FAM184AQ8NB25 1140 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 TP53I13Q8NBR0 393 aaPredicted RBP6.04□□□□□ -1.44
LINC00342-201ENST00000412393 KREMEN1Q96MU8 473 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 CCDC94Q9BW85 323 aaPredicted RBP6.04□□□□□ -1.44
LINC00342-201ENST00000412393 AMNQ9BXJ7 453 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 WDR11Q9BZH6 1224 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 MAF1Q9H063 256 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 TNFRSF10DQ9UBN6 386 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 MAD2L2Q9UI95 211 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 MRPL11Q9Y3B7 192 aaKnown RBP6.04□□□□□ -1.44
LINC00342-201ENST00000412393 Q9Y3F1 56 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 SCN5AQ14524 2016 aa6.04□□□□□ -1.44
LINC00342-201ENST00000412393 RANBP2P49792 3224 aaKnown RBP6.04□□□□□ -1.44
LINC00342-201ENST00000412393 SHISA3A0PJX4 238 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 SLC27A2O14975 620 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms