RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 C15orf39Q6ZRI6 1047 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 KIAA1328Q86T90 577 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 SERINC5Q86VE9 423 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 VPS36Q86VN1 386 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 ARHGEF19Q8IW93 802 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 PPM1KQ8N3J5 372 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 TXLNBQ8N3L3 684 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 CEP120Q8N960 986 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 ACRBPQ8NEB7 543 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 TAS1R2Q8TE23 839 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 C16orf45Q96MC5 204 aaPredicted RBP12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 EIF3CQ99613 913 aaKnown RBP12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 CELF4Q9BZC1 486 aaKnown RBP12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 IMPG2Q9BZV3 1241 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 CDHR5Q9HBB8 845 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 UBE2TQ9NPD8 197 aaPredicted RBP12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 LUC7LQ9NQ29 371 aaKnown RBP12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 ARHGAP20Q9P2F6 1191 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 AJAP1Q9UKB5 411 aaPredicted RBP12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 ADGRG1Q9Y653 693 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 CDY2AQ9Y6F7 541 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 GFPT2O94808 682 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 CXCL8P10145 99 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 ANXA13P27216 316 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 GRM5P41594 1212 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 KIF11P52732 1056 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 TFAMQ00059 246 aaKnown RBP12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 ENOX2Q16206 610 aaKnown RBP12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 PTGISQ16647 500 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 DUOXA2Q1HG44 320 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 TDRD10Q5VZ19 366 aaKnown RBP12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 PHLDB3Q6NSJ2 640 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 ENOSF1Q7L5Y1 443 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 RPAINQ86UA6 219 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 GPIHBP1Q8IV16 184 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 SH3TC2Q8TF17 1288 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 ZNF516Q92618 1163 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 SEMA4DQ92854 862 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 ACAP3Q96P50 834 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 TRIM6Q9C030 488 aaPredicted RBP12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 PIN4Q9Y237 131 aaKnown RBP12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 PTPRJQ12913 1337 aa12.53□□□□□ -0.4
SNRNP35-202ENST00000412157 CENPFP49454 3210 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 A0A0U1RQG5 324 aaPredicted RBP12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 B4GALT4O60513 344 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 LRRN2O75325 713 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 TUBB4AP04350 444 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 PLEKP08567 350 aaPredicted RBP12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 TNNT1P13805 278 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 PRKCIP41743 596 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 YARSP54577 528 aaKnown RBP12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 PTK7Q13308 1070 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 TRPC3Q13507 836 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 ARHGAP29Q52LW3 1261 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 HGSNATQ68CP4 663 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 LHX8Q68G74 356 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 CD302Q8IX05 232 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 REXO1L1PQ8IX06 675 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 OR5B17Q8NGF7 314 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 MTMR12Q9C0I1 747 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 ASB7Q9H672 318 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 STARD7Q9NQZ5 370 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 MROH7Q68CQ1 1323 aa12.52□□□□□ -0.41
SNRNP35-202ENST00000412157 A0A1W2PQ45 241 aaPredicted RBP12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 A0A1W2PQY0 241 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 LACTBL1A8MY62 500 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 H0YGN5 161 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 EVI5O60447 810 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 RPS6KA5O75582 802 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 CTSHP09668 335 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 TBXAS1P24557 533 aaPredicted RBP12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 THPOP40225 353 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 GCNT1Q02742 428 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 NCOA4Q13772 614 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 CHRDL2Q6WN34 429 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 NYAP1Q6ZVC0 841 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 TRAPPC11Q7Z392 1133 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 FAM228AQ86W67 206 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 NT5DC4Q86YG4 428 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 EFCAB13Q8IY85 973 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 TMEM192Q8IY95 271 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 TMEM40Q8WWA1 233 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 PI4K2AQ9BTU6 479 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 SEZ6LQ9BYH1 1024 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 UNC93B1Q9H1C4 597 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 HAUS4Q9H6D7 363 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 R3HCC1Q9Y3T6 440 aaKnown RBP12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 GRIN2DO15399 1336 aa12.51□□□□□ -0.41
SNRNP35-202ENST00000412157 BRCA2P51587 3418 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 CAND2O75155 1236 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 VNN1O95497 513 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 PNMA6AP0CW24 399 aaPredicted RBP12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 HOXA11P31270 313 aaPredicted RBP12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 USP8P40818 1118 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 VAV2P52735 878 aa12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 NOP14P78316 857 aaKnown RBP12.5□□□□□ -0.41
SNRNP35-202ENST00000412157 MGAT3Q09327 533 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms