RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 RNF39Q9H2S5 420 aa19.48■□□□□ 0.71
CXXC1-202ENST00000412036 HMX1Q9NP08 348 aaPredicted RBP19.48■□□□□ 0.71
CXXC1-202ENST00000412036 WBP1LQ9NX94 342 aa19.48■□□□□ 0.71
CXXC1-202ENST00000412036 CITO14578 2027 aa19.47■□□□□ 0.71
CXXC1-202ENST00000412036 MGAT3Q09327 533 aa19.47■□□□□ 0.71
CXXC1-202ENST00000412036 JADE1Q6IE81 842 aa19.47■□□□□ 0.71
CXXC1-202ENST00000412036 TRAPPC11Q7Z392 1133 aa19.47■□□□□ 0.71
CXXC1-202ENST00000412036 LNX1Q8TBB1 728 aaPredicted RBP19.47■□□□□ 0.71
CXXC1-202ENST00000412036 ZMAT2Q96NC0 199 aaKnown RBP19.47■□□□□ 0.71
CXXC1-202ENST00000412036 PACSIN1Q9BY11 444 aa19.47■□□□□ 0.71
CXXC1-202ENST00000412036 AGO3Q9H9G7 860 aaKnown RBP19.47■□□□□ 0.71
CXXC1-202ENST00000412036 SNTG2Q9NY99 539 aa19.47■□□□□ 0.71
CXXC1-202ENST00000412036 SIX4Q9UIU6 781 aa19.47■□□□□ 0.71
CXXC1-202ENST00000412036 SALL4Q9UJQ4 1053 aa19.47■□□□□ 0.71
CXXC1-202ENST00000412036 LCA5LO95447 670 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 CRYBB1P53674 252 aaPredicted RBP19.46■□□□□ 0.71
CXXC1-202ENST00000412036 MRPS6P82932 125 aaKnown RBP19.46■□□□□ 0.71
CXXC1-202ENST00000412036 TFAMQ00059 246 aaKnown RBP19.46■□□□□ 0.71
CXXC1-202ENST00000412036 PTGISQ16647 500 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 SESTD1Q86VW0 696 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 WDR49Q8IV35 697 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 TRPV6Q9H1D0 765 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 PTPN22Q9Y2R2 807 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 MEIS3P2A8K0S8 358 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 GNAT1P11488 350 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 HSPA6P17066 643 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 PRKCIP41743 596 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 PIK3CAP42336 1068 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 MYL6P60660 151 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 PTPN14Q15678 1187 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 TRIM71Q2Q1W2 868 aaKnown RBP19.46■□□□□ 0.71
CXXC1-202ENST00000412036 SLC9C1Q4G0N8 1177 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 SYT10Q6XYQ8 523 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.46■□□□□ 0.71
CXXC1-202ENST00000412036 RNF180Q86T96 592 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 CCDC170Q8IYT3 715 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 SENP6Q9GZR1 1112 aaPredicted RBP19.46■□□□□ 0.71
CXXC1-202ENST00000412036 NENFQ9UMX5 172 aa19.46■□□□□ 0.71
CXXC1-202ENST00000412036 PIN4Q9Y237 131 aaKnown RBP19.46■□□□□ 0.71
CXXC1-202ENST00000412036 A0A1W2PQ45 241 aaPredicted RBP19.45■□□□□ 0.7
CXXC1-202ENST00000412036 A0A1W2PQY0 241 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 SSU72P8A0A1W2PR75 194 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 DDX3XO00571 662 aaKnown RBP eCLIP19.45■□□□□ 0.72e-7■■□□□ 13.3
CXXC1-202ENST00000412036 B4GALT4O60513 344 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 AKAP5P24588 427 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 NCOA4Q13772 614 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 TAF2Q6P1X5 1199 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 DNAJC5GQ8N7S2 189 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 C1orf127Q8N9H9 656 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 ARRDC4Q8NCT1 418 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.45■□□□□ 0.71e-6■■■■□ 26.6
CXXC1-202ENST00000412036 RPF1Q9H9Y2 349 aaKnown RBP19.45■□□□□ 0.7
CXXC1-202ENST00000412036 SGPL1O95470 568 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 CLTAP09496 248 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 STAT1P42224 750 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 SLC47A2Q86VL8 602 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 SHC3Q92529 594 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 VTI1AQ96AJ9 217 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 XYLT2Q9H1B5 865 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 MYO6Q9UM54 1294 aa19.45■□□□□ 0.7
CXXC1-202ENST00000412036 CYP26A1O43174 497 aa19.44■□□□□ 0.7
CXXC1-202ENST00000412036 ZSCAN12O43309 604 aa19.44■□□□□ 0.7
CXXC1-202ENST00000412036 AKR1B10O60218 316 aa19.44■□□□□ 0.7
CXXC1-202ENST00000412036 CETN1Q12798 172 aa19.44■□□□□ 0.7
CXXC1-202ENST00000412036 FAM71AQ8IYT1 594 aa19.44■□□□□ 0.7
CXXC1-202ENST00000412036 PCSK9Q8NBP7 692 aaKnown RBP19.44■□□□□ 0.7
CXXC1-202ENST00000412036 ZNF592Q92610 1267 aa19.44■□□□□ 0.7
CXXC1-202ENST00000412036 NUCKS1Q9H1E3 243 aaKnown RBP19.44■□□□□ 0.7
CXXC1-202ENST00000412036 TAS2R14Q9NYV8 317 aa19.44■□□□□ 0.7
CXXC1-202ENST00000412036 R3HCC1Q9Y3T6 440 aaKnown RBP19.44■□□□□ 0.7
CXXC1-202ENST00000412036 PCDHA13Q9Y5I0 950 aa19.44■□□□□ 0.7
CXXC1-202ENST00000412036 ACO1P21399 889 aaKnown RBP19.44■□□□□ 0.7
CXXC1-202ENST00000412036 THPOP40225 353 aa19.44■□□□□ 0.7
CXXC1-202ENST00000412036 DNTTIP2Q5QJE6 756 aaKnown RBP19.44■□□□□ 0.7
CXXC1-202ENST00000412036 MROH7Q68CQ1 1323 aa19.44■□□□□ 0.7
CXXC1-202ENST00000412036 SLC27A1Q6PCB7 646 aa19.44■□□□□ 0.7
CXXC1-202ENST00000412036 NME8Q8N427 588 aa19.44■□□□□ 0.7
CXXC1-202ENST00000412036 NT5C1BQ96P26 610 aa19.44■□□□□ 0.7
CXXC1-202ENST00000412036 APOL6Q9BWW8 343 aa19.44■□□□□ 0.7
CXXC1-202ENST00000412036 CYLC1P35663 651 aaPredicted RBP19.43■□□□□ 0.7
CXXC1-202ENST00000412036 GLRA4Q5JXX5 417 aa19.43■□□□□ 0.7
CXXC1-202ENST00000412036 USP37Q86T82 979 aa19.43■□□□□ 0.7
CXXC1-202ENST00000412036 NOP9Q86U38 636 aaKnown RBP19.43■□□□□ 0.7
CXXC1-202ENST00000412036 GLYCTKQ8IVS8 523 aa19.43■□□□□ 0.7
CXXC1-202ENST00000412036 SMG8Q8ND04 991 aaKnown RBP19.43■□□□□ 0.7
CXXC1-202ENST00000412036 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.43■□□□□ 0.7
CXXC1-202ENST00000412036 DEF6Q9H4E7 631 aa19.43■□□□□ 0.7
CXXC1-202ENST00000412036 PCDH10Q9P2E7 1040 aa19.43■□□□□ 0.7
CXXC1-202ENST00000412036 SCN1AP35498 2009 aa19.43■□□□□ 0.7
CXXC1-202ENST00000412036 PPEF2O14830 753 aa19.42■□□□□ 0.7
CXXC1-202ENST00000412036 CHRNB2P17787 502 aa19.42■□□□□ 0.7
CXXC1-202ENST00000412036 USP8P40818 1118 aa19.42■□□□□ 0.7
CXXC1-202ENST00000412036 GRM5P41594 1212 aa19.42■□□□□ 0.7
CXXC1-202ENST00000412036 AFF1P51825 1210 aaKnown RBP19.42■□□□□ 0.7
CXXC1-202ENST00000412036 NOP14P78316 857 aaKnown RBP19.42■□□□□ 0.7
CXXC1-202ENST00000412036 SLC18A3Q16572 532 aa19.42■□□□□ 0.7
CXXC1-202ENST00000412036 NOTUMQ6P988 496 aa19.42■□□□□ 0.7
CXXC1-202ENST00000412036 TRAF7Q6Q0C0 670 aa19.42■□□□□ 0.7
CXXC1-202ENST00000412036 SLC30A5Q8TAD4 765 aa19.42■□□□□ 0.7
CXXC1-202ENST00000412036 PAK6Q9NQU5 681 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms