RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 MTRRQ9UBK8 725 aa18.13■□□□□ 0.49
SCAMP4-203ENST00000411971 CA14Q9ULX7 337 aa18.13■□□□□ 0.49
SCAMP4-203ENST00000411971 NUMBLQ9Y6R0 609 aa18.13■□□□□ 0.49
SCAMP4-203ENST00000411971 PHLPP2Q6ZVD8 1323 aa18.13■□□□□ 0.49
SCAMP4-203ENST00000411971 NPHP3-ACAD11A0A0J9YXS1 232 aa18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 B3GAT3O94766 335 aa18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 GRM5P41594 1212 aa18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 ATP2C1P98194 919 aaPredicted RBP18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 RAB33AQ14088 237 aa18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 ZNF568Q3ZCX4 644 aa18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 PARM1Q6UWI2 310 aa18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 SLC7A14Q8TBB6 771 aa18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 STAMQ92783 540 aa18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 C18orf25Q96B23 403 aaPredicted RBP18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 DPP7Q9UHL4 492 aa18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 FBXL21Q9UKT6 434 aa18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 DNM3Q9UQ16 869 aa18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 CACNA1IQ9P0X4 2223 aa18.12■□□□□ 0.49
SCAMP4-203ENST00000411971 PTPRZ1P23471 2315 aaPredicted RBP18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 FAM186AA6NE01 2351 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 PROB1E7EW31 1015 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 EIF5BO60841 1220 aaKnown RBP18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 FSHRP23945 695 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 PRPHP41219 470 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 NUBP1P53384 320 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 CACNB1Q02641 598 aaPredicted RBP18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 CREMQ03060 361 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 HYIQ5T013 277 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 DCLRE1AQ6PJP8 1040 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 CCDC105Q8IYK2 499 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 TMX3Q96JJ7 454 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 SNX27Q96L92 541 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 TMEM134Q9H6X4 195 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 KMT5AQ9NQR1 393 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 DNMT3BQ9UBC3 853 aaKnown RBP18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 WNT16Q9UBV4 365 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 CDY1Q9Y6F8 540 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 MIA3Q5JRA6 1907 aa18.11■□□□□ 0.49
SCAMP4-203ENST00000411971 FANCMQ8IYD8 2048 aa18.1■□□□□ 0.49
SCAMP4-203ENST00000411971 SRFP11831 508 aa18.1■□□□□ 0.49
SCAMP4-203ENST00000411971 HARSP12081 509 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-203ENST00000411971 NBL1P41271 181 aa18.1■□□□□ 0.49
SCAMP4-203ENST00000411971 ZRSR1Q15695 479 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-203ENST00000411971 ARSHQ5FYA8 562 aa18.1■□□□□ 0.49
SCAMP4-203ENST00000411971 PPM1LQ5SGD2 360 aa18.1■□□□□ 0.49
SCAMP4-203ENST00000411971 AXDND1Q5T1B0 1012 aaPredicted RBP18.1■□□□□ 0.49
SCAMP4-203ENST00000411971 KRT79Q5XKE5 535 aa18.1■□□□□ 0.49
SCAMP4-203ENST00000411971 MCTP1Q6DN14 999 aa18.1■□□□□ 0.49
SCAMP4-203ENST00000411971 DTHD1Q6ZMT9 781 aa18.1■□□□□ 0.49
SCAMP4-203ENST00000411971 FRMD5Q7Z6J6 570 aa18.1■□□□□ 0.49
SCAMP4-203ENST00000411971 FGF13Q92913 245 aa18.1■□□□□ 0.49
SCAMP4-203ENST00000411971 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.1■□□□□ 0.497e-7■□□□□ 9.9
SCAMP4-203ENST00000411971 SPTBN4Q9H254 2564 aa18.1■□□□□ 0.49
SCAMP4-203ENST00000411971 DCHS1Q96JQ0 3298 aa18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 LRRN2O75325 713 aa18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 GLULP15104 373 aa18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 GJB2P29033 226 aa18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 SLC12A3P55017 1021 aa18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 GRIN1Q05586 938 aa18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 ELAVL2Q12926 359 aaKnown RBP18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 DMP1Q13316 513 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 SLC5A9Q2M3M2 681 aa18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 ELMSAN1Q6PJG2 1045 aa18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 DTWD2Q8NBA8 298 aa18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 TMEM161BQ8NDZ6 487 aa18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 NTPCRQ9BSD7 190 aaKnown RBP18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 MRPL4Q9BYD3 311 aaKnown RBP18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 TBC1D17Q9HA65 648 aa18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 DLGAP2Q9P1A6 1054 aa18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 CDH7Q9ULB5 785 aa18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 POLIQ9UNA4 740 aa18.09■□□□□ 0.49
SCAMP4-203ENST00000411971 WDR27A2RRH5 827 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 VWA3AA6NCI4 1184 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 PRR23AA6NEV1 266 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 LAD1O00515 517 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 PODXLO00592 558 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 TBC1D4O60343 1298 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 HNRNPA1P09651 372 aaKnown RBP eCLIP18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 GUCY2CP25092 1073 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 GPC5P78333 572 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 ROR1Q01973 937 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 RABEP1Q15276 862 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 SLC10A6Q3KNW5 377 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 TMEM119Q4V9L6 283 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 LIN9Q5TKA1 542 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 MPZL3Q6UWV2 235 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 SYT2Q8N9I0 419 aaPredicted RBP18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 ING5Q8WYH8 240 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 CCDC94Q9BW85 323 aaPredicted RBP18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 CNTN3Q9P232 1028 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 BACE2Q9Y5Z0 518 aa18.08■□□□□ 0.48
SCAMP4-203ENST00000411971 PATJQ8NI35 1801 aa18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 FRYLO94915 3013 aa18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 ST18O60284 1047 aa18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 SEC24AO95486 1093 aa18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 DCNP07585 359 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 MAPTP10636 758 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 MCF2P10911 925 aa18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 KCNE1P15382 129 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms