RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ING5Q8WYH8 240 aa18.39■□□□□ 0.53
MRPL55-220ENST00000411464 PPP1R10Q96QC0 940 aaKnown RBP18.39■□□□□ 0.53
MRPL55-220ENST00000411464 NELL2Q99435 816 aa18.39■□□□□ 0.53
MRPL55-220ENST00000411464 GDE1Q9NZC3 331 aa18.39■□□□□ 0.53
MRPL55-220ENST00000411464 FBXO4Q9UKT5 387 aa18.39■□□□□ 0.53
MRPL55-220ENST00000411464 MTF2Q9Y483 593 aaPredicted RBP18.39■□□□□ 0.53
MRPL55-220ENST00000411464 BACE2Q9Y5Z0 518 aa18.39■□□□□ 0.53
MRPL55-220ENST00000411464 NCAM2O15394 837 aa18.38■□□□□ 0.53
MRPL55-220ENST00000411464 OR52Z1P0C646 297 aa18.38■□□□□ 0.53
MRPL55-220ENST00000411464 CD72P21854 359 aa18.38■□□□□ 0.53
MRPL55-220ENST00000411464 ELF1P32519 619 aa18.38■□□□□ 0.53
MRPL55-220ENST00000411464 MAGEA9P43362 315 aa18.38■□□□□ 0.53
MRPL55-220ENST00000411464 CSTF1Q05048 431 aaKnown RBP18.38■□□□□ 0.53
MRPL55-220ENST00000411464 PUM1Q14671 1186 aaKnown RBP eCLIP18.38■□□□□ 0.53
MRPL55-220ENST00000411464 UPP1Q16831 310 aa18.38■□□□□ 0.53
MRPL55-220ENST00000411464 ATRIPQ8WXE1 791 aa18.38■□□□□ 0.53
MRPL55-220ENST00000411464 KIFAP3Q92845 792 aa18.38■□□□□ 0.53
MRPL55-220ENST00000411464 MCRS1Q96EZ8 462 aa18.38■□□□□ 0.53
MRPL55-220ENST00000411464 KIFC3Q9BVG8 833 aa18.38■□□□□ 0.53
MRPL55-220ENST00000411464 LTB4R2Q9NPC1 389 aa18.38■□□□□ 0.53
MRPL55-220ENST00000411464 K7ERI5 159 aa18.37■□□□□ 0.53
MRPL55-220ENST00000411464 ECI2O75521 394 aa18.37■□□□□ 0.53
MRPL55-220ENST00000411464 EDN1P05305 212 aa18.37■□□□□ 0.53
MRPL55-220ENST00000411464 RHOP08100 348 aa18.37■□□□□ 0.53
MRPL55-220ENST00000411464 MUTP22033 750 aa18.37■□□□□ 0.53
MRPL55-220ENST00000411464 IGFBP6P24592 240 aaPredicted RBP18.37■□□□□ 0.53
MRPL55-220ENST00000411464 TKTP29401 623 aaKnown RBP18.37■□□□□ 0.53
MRPL55-220ENST00000411464 YARSP54577 528 aaKnown RBP18.37■□□□□ 0.53
MRPL55-220ENST00000411464 ZNF174Q15697 407 aa18.37■□□□□ 0.53
MRPL55-220ENST00000411464 NT5DC1Q5TFE4 455 aa18.37■□□□□ 0.53
MRPL55-220ENST00000411464 HAUS3Q68CZ6 603 aa18.37■□□□□ 0.53
MRPL55-220ENST00000411464 SUMF1Q8NBK3 374 aa18.37■□□□□ 0.53
MRPL55-220ENST00000411464 ZNF461Q8TAF7 563 aa18.37■□□□□ 0.53
MRPL55-220ENST00000411464 DDX27Q96GQ7 796 aaKnown RBP18.37■□□□□ 0.53
MRPL55-220ENST00000411464 POLD4Q9HCU8 107 aa18.37■□□□□ 0.53
MRPL55-220ENST00000411464 TOPORSQ9NS56 1045 aaPredicted RBP18.37■□□□□ 0.53
MRPL55-220ENST00000411464 TDRD15B5MCY1 1934 aaKnown RBP18.37■□□□□ 0.53
MRPL55-220ENST00000411464 DMXL1Q9Y485 3027 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 SMIM28A0A1B0GU29 152 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 I3L4J1 428 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 PRRG1O14668 218 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 SPTLC1O15269 473 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 LRG1P02750 347 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 PTPN2P17706 415 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 NEK4P51957 841 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 GUCY1B3Q02153 619 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 ORC2Q13416 577 aaPredicted RBP18.36■□□□□ 0.53
MRPL55-220ENST00000411464 ARID2Q68CP9 1835 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 CD300LGQ6UXG3 332 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 ZNF852Q6ZMS4 543 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 TPRG1Q6ZUI0 275 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 CCDC94Q9BW85 323 aaPredicted RBP18.36■□□□□ 0.53
MRPL55-220ENST00000411464 GOLGA2P5Q9HBQ8 144 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 NCDNQ9UBB6 729 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 TNFSF13BQ9Y275 285 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 MRPS17Q9Y2R5 130 aaKnown RBP18.36■□□□□ 0.53
MRPL55-220ENST00000411464 PCDHGA2Q9Y5H1 932 aa18.36■□□□□ 0.53
MRPL55-220ENST00000411464 DOCK8Q8NF50 2099 aa18.35■□□□□ 0.53
MRPL55-220ENST00000411464 MED19A0JLT2 244 aaPredicted RBP18.35■□□□□ 0.53
MRPL55-220ENST00000411464 CCT6AP40227 531 aaKnown RBP18.35■□□□□ 0.53
MRPL55-220ENST00000411464 BRCC3P46736 316 aa18.35■□□□□ 0.53
MRPL55-220ENST00000411464 VARS2Q5ST30 1063 aaKnown RBP18.35■□□□□ 0.53
MRPL55-220ENST00000411464 BHMT2Q9H2M3 363 aa18.35■□□□□ 0.53
MRPL55-220ENST00000411464 AVENQ9NQS1 362 aaPredicted RBP18.35■□□□□ 0.53
MRPL55-220ENST00000411464 SLC38A7Q9NVC3 462 aa18.35■□□□□ 0.53
MRPL55-220ENST00000411464 CCDC169A6NNP5 214 aa18.34■□□□□ 0.53
MRPL55-220ENST00000411464 GRM5P41594 1212 aa18.34■□□□□ 0.53
MRPL55-220ENST00000411464 ARPP19P56211 112 aa18.34■□□□□ 0.53
MRPL55-220ENST00000411464 SLC5A9Q2M3M2 681 aa18.34■□□□□ 0.53
MRPL55-220ENST00000411464 TANGO2Q6ICL3 276 aa18.34■□□□□ 0.53
MRPL55-220ENST00000411464 SLC8B1Q6J4K2 584 aa18.34■□□□□ 0.53
MRPL55-220ENST00000411464 C3orf58Q8NDZ4 430 aa18.34■□□□□ 0.53
MRPL55-220ENST00000411464 SECISBP2LQ93073 1101 aaKnown RBP18.34■□□□□ 0.53
MRPL55-220ENST00000411464 CLDN23Q96B33 292 aa18.34■□□□□ 0.53
MRPL55-220ENST00000411464 ELSPBP1Q96BH3 223 aa18.34■□□□□ 0.53
MRPL55-220ENST00000411464 C8orf76Q96K31 380 aa18.34■□□□□ 0.53
MRPL55-220ENST00000411464 PLA2G2FQ9BZM2 168 aa18.34■□□□□ 0.53
MRPL55-220ENST00000411464 ZSCAN32Q9NX65 697 aa18.34■□□□□ 0.53
MRPL55-220ENST00000411464 DLL3Q9NYJ7 618 aa18.34■□□□□ 0.53
MRPL55-220ENST00000411464 MTCL1Q9Y4B5 1905 aaKnown RBP18.33■□□□□ 0.53
MRPL55-220ENST00000411464 ARHGEF37A1IGU5 675 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 H7C4K7 107 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 PODXLO00592 558 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 ZNF197O14709 1029 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 ABLIM3O94929 683 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 ATF2P15336 505 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 CEBPBP17676 345 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 RPS9P46781 194 aaKnown RBP18.33■□□□□ 0.52
MRPL55-220ENST00000411464 OSTNP61366 133 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 ROR1Q01973 937 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 GPR161Q8N6U8 529 aaKnown RBP18.33■□□□□ 0.52
MRPL55-220ENST00000411464 CORO1BQ9BR76 489 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 TCHPQ9BT92 498 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 FOXP1Q9H334 677 aaPredicted RBP18.33■□□□□ 0.52
MRPL55-220ENST00000411464 CYP4F11Q9HBI6 524 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 HEBP1Q9NRV9 189 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 LRWD1Q9UFC0 647 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 KIAA1024Q9UPX6 916 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 NUB1Q9Y5A7 615 aa18.33■□□□□ 0.52
MRPL55-220ENST00000411464 SYN3O14994 580 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms