RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PLCD4Q9BRC7 762 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 GLIS2Q9BZE0 524 aaPredicted RBP17.81■□□□□ 0.44
LIMS2-208ENST00000410011 DCLK3Q9C098 648 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 SLC38A10Q9HBR0 1119 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 CD248Q9HCU0 757 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 DENND3A2RUS2 1198 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 DLATP10515 647 aaKnown RBP17.81■□□□□ 0.44
LIMS2-208ENST00000410011 SLC8A1P32418 973 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 SLC39A4Q6P5W5 647 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 OGFOD1Q8N543 542 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 GBP7Q8N8V2 638 aaPredicted RBP17.81■□□□□ 0.44
LIMS2-208ENST00000410011 C1orf54Q8WWF1 131 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 KCNN1Q92952 543 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 DDX27Q96GQ7 796 aaKnown RBP17.81■□□□□ 0.44
LIMS2-208ENST00000410011 KMT5AQ9NQR1 393 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 LGALS13Q9UHV8 139 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 ACTL7BQ9Y614 415 aa17.81■□□□□ 0.44
LIMS2-208ENST00000410011 CYP1A1P04798 512 aaPredicted RBP17.8■□□□□ 0.44
LIMS2-208ENST00000410011 KLF1Q13351 362 aaPredicted RBP17.8■□□□□ 0.44
LIMS2-208ENST00000410011 OTUD6AQ7L8S5 288 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 FAM228AQ86W67 206 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 GPD1LQ8N335 351 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 UHMK1Q8TAS1 419 aaKnown RBP17.8■□□□□ 0.44
LIMS2-208ENST00000410011 MYCBPQ99417 103 aaPredicted RBP17.8■□□□□ 0.44
LIMS2-208ENST00000410011 POP1Q99575 1024 aaKnown RBP17.8■□□□□ 0.44
LIMS2-208ENST00000410011 FOXP3Q9BZS1 431 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 KIAA1586Q9HCI6 787 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 ASIC3Q9UHC3 531 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 TPX2Q9ULW0 747 aaKnown RBP17.8■□□□□ 0.44
LIMS2-208ENST00000410011 MROH7Q68CQ1 1323 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 MYPNQ86TC9 1320 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 MAFGO15525 162 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 CCNE2O96020 404 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 POTEJP0CG39 1038 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 ELF3P78545 371 aaPredicted RBP17.8■□□□□ 0.44
LIMS2-208ENST00000410011 MKRN3Q13064 507 aaKnown RBP17.8■□□□□ 0.44
LIMS2-208ENST00000410011 CCNG2Q16589 344 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 LONRF1Q17RB8 773 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 CHADLQ6NUI6 762 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 VSTM1Q6UX27 236 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 NSMFQ6X4W1 530 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 CEP128Q6ZU80 1094 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 ANO5Q75V66 913 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 CCDC25Q86WR0 208 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 VCPIP1Q96JH7 1222 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 DDX23Q9BUQ8 820 aaKnown RBP17.8■□□□□ 0.44
LIMS2-208ENST00000410011 CHST7Q9NS84 486 aa17.8■□□□□ 0.44
LIMS2-208ENST00000410011 USP15Q9Y4E8 981 aaPredicted RBP17.8■□□□□ 0.44
LIMS2-208ENST00000410011 ZNFX1Q9P2E3 1918 aaKnown RBP17.79■□□□□ 0.44
LIMS2-208ENST00000410011 PSTPIP1O43586 416 aa17.79■□□□□ 0.44
LIMS2-208ENST00000410011 DKC1O60832 514 aaKnown RBP eCLIP17.79■□□□□ 0.44
LIMS2-208ENST00000410011 MAP2K2P36507 400 aa17.79■□□□□ 0.44
LIMS2-208ENST00000410011 MSL1Q68DK7 614 aa17.79■□□□□ 0.44
LIMS2-208ENST00000410011 PPP1R2P3Q6NXS1 205 aa17.79■□□□□ 0.44
LIMS2-208ENST00000410011 LARGE2Q8N3Y3 721 aa17.79■□□□□ 0.44
LIMS2-208ENST00000410011 CKAP2Q8WWK9 683 aa17.79■□□□□ 0.44
LIMS2-208ENST00000410011 TAAR1Q96RJ0 339 aa17.79■□□□□ 0.44
LIMS2-208ENST00000410011 MOV10L1Q9BXT6 1211 aaKnown RBP17.79■□□□□ 0.44
LIMS2-208ENST00000410011 MTFR1LQ9H019 292 aa17.79■□□□□ 0.44
LIMS2-208ENST00000410011 PDLIM7Q9NR12 457 aa17.79■□□□□ 0.44
LIMS2-208ENST00000410011 TCEAL9Q9UHQ7 104 aa17.79■□□□□ 0.44
LIMS2-208ENST00000410011 KCNG1Q9UIX4 513 aa17.79■□□□□ 0.44
LIMS2-208ENST00000410011 BRWD3Q6RI45 1802 aa17.79■□□□□ 0.44
LIMS2-208ENST00000410011 TMEM120BA0PK00 339 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 TMEM150BA6NC51 233 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 H0YCG3 227 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 O00370 1275 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 ATP9AO75110 1047 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 PROSCO94903 275 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 ITGA8P53708 1063 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 RPS6P62753 249 aaKnown RBP17.78■□□□□ 0.44
LIMS2-208ENST00000410011 GALNTL6Q49A17 601 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 CRELD2Q6UXH1 353 aaPredicted RBP17.78■□□□□ 0.44
LIMS2-208ENST00000410011 TRIM72Q6ZMU5 477 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 CCDC89Q8N998 374 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 POMGNT1Q8WZA1 660 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 PDCD2LQ9BRP1 358 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 GINM1Q9NU53 330 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.78■□□□□ 0.44
LIMS2-208ENST00000410011 ZNF219Q9P2Y4 722 aaPredicted RBP17.78■□□□□ 0.44
LIMS2-208ENST00000410011 PCDHA10Q9Y5I2 948 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 ACSL3O95573 720 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 ATF2P15336 505 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 CHRNA5P30532 468 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 CHKAP35790 457 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 SH2D3AQ9BRG2 576 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 TMEM39BQ9GZU3 492 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 KIAA1683Q9H0B3 1180 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 TOPORSQ9NS56 1045 aaPredicted RBP17.78■□□□□ 0.44
LIMS2-208ENST00000410011 ANAPC5Q9UJX4 755 aa17.78■□□□□ 0.44
LIMS2-208ENST00000410011 SUN1O94901 812 aa17.77■□□□□ 0.44
LIMS2-208ENST00000410011 FDX1P10109 184 aa17.77■□□□□ 0.44
LIMS2-208ENST00000410011 KRT5P13647 590 aa17.77■□□□□ 0.44
LIMS2-208ENST00000410011 NEDD9Q14511 834 aa17.77■□□□□ 0.44
LIMS2-208ENST00000410011 PLA2G4FQ68DD2 849 aa17.77■□□□□ 0.44
LIMS2-208ENST00000410011 SAMD1Q6SPF0 538 aaPredicted RBP17.77■□□□□ 0.44
LIMS2-208ENST00000410011 CCDC63Q8NA47 563 aa17.77■□□□□ 0.44
LIMS2-208ENST00000410011 MCPH1Q8NEM0 835 aa17.77■□□□□ 0.44
LIMS2-208ENST00000410011 FAM212AQ96EL1 285 aa17.77■□□□□ 0.44
LIMS2-208ENST00000410011 ZNF341Q9BYN7 854 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms