RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 ARMCX3Q9UH62 379 aaPredicted RBP22.36■■□□□ 1.17
C4orf48-202ENST00000409860 UBQLN1Q9UMX0 589 aaKnown RBP22.36■■□□□ 1.17
C4orf48-202ENST00000409860 COLQQ9Y215 455 aaPredicted RBP22.36■■□□□ 1.17
C4orf48-202ENST00000409860 SMTNL1A8MU46 457 aa22.35■■□□□ 1.17
C4orf48-202ENST00000409860 NFICP08651 508 aa22.35■■□□□ 1.17
C4orf48-202ENST00000409860 VAMP7P51809 220 aa22.35■■□□□ 1.17
C4orf48-202ENST00000409860 WNT7BP56706 349 aa22.35■■□□□ 1.17
C4orf48-202ENST00000409860 SPAG1Q07617 926 aa22.35■■□□□ 1.17
C4orf48-202ENST00000409860 WDR49Q8IV35 697 aa22.35■■□□□ 1.17
C4orf48-202ENST00000409860 FIBCD1Q8N539 461 aa22.35■■□□□ 1.17
C4orf48-202ENST00000409860 SP7Q8TDD2 431 aaPredicted RBP22.35■■□□□ 1.17
C4orf48-202ENST00000409860 ZMAT2Q96NC0 199 aaKnown RBP22.35■■□□□ 1.17
C4orf48-202ENST00000409860 CGRRF1Q99675 332 aa22.35■■□□□ 1.17
C4orf48-202ENST00000409860 MAGEC2Q9UBF1 373 aaPredicted RBP22.35■■□□□ 1.17
C4orf48-202ENST00000409860 MSRAQ9UJ68 235 aa22.35■■□□□ 1.17
C4orf48-202ENST00000409860 PLAGL2Q9UPG8 496 aa22.35■■□□□ 1.17
C4orf48-202ENST00000409860 BECN2A8MW95 431 aa22.34■■□□□ 1.17
C4orf48-202ENST00000409860 IKBKBO14920 756 aa22.34■■□□□ 1.17
C4orf48-202ENST00000409860 TNNI1P19237 187 aa22.34■■□□□ 1.17
C4orf48-202ENST00000409860 TFAMQ00059 246 aaKnown RBP22.34■■□□□ 1.17
C4orf48-202ENST00000409860 BFSP1Q12934 665 aa22.34■■□□□ 1.17
C4orf48-202ENST00000409860 TUSC3Q13454 348 aa22.34■■□□□ 1.17
C4orf48-202ENST00000409860 SPOUT1Q5T280 376 aaKnown RBP22.34■■□□□ 1.17
C4orf48-202ENST00000409860 EFCAB13Q8IY85 973 aa22.34■■□□□ 1.17
C4orf48-202ENST00000409860 BEST2Q8NFU1 509 aa22.34■■□□□ 1.17
C4orf48-202ENST00000409860 PARD3BQ8TEW8 1205 aa22.34■■□□□ 1.17
C4orf48-202ENST00000409860 CACTINQ8WUQ7 758 aaKnown RBP22.34■■□□□ 1.17
C4orf48-202ENST00000409860 TMEM191BP0C7N4 346 aa22.33■■□□□ 1.17
C4orf48-202ENST00000409860 CYP3A5P20815 502 aa22.33■■□□□ 1.17
C4orf48-202ENST00000409860 CREBRFQ8IUR6 639 aa22.33■■□□□ 1.17
C4orf48-202ENST00000409860 FAM200AQ8TCP9 573 aa22.33■■□□□ 1.17
C4orf48-202ENST00000409860 BORCS6Q96GS4 357 aa22.33■■□□□ 1.17
C4orf48-202ENST00000409860 ANKRD36BP1Q96IX9 119 aa22.33■■□□□ 1.17
C4orf48-202ENST00000409860 CNOT6LQ96LI5 555 aaKnown RBP22.33■■□□□ 1.17
C4orf48-202ENST00000409860 PBX4Q9BYU1 374 aa22.33■■□□□ 1.17
C4orf48-202ENST00000409860 MRPL42Q9Y6G3 142 aaKnown RBP22.33■■□□□ 1.17
C4orf48-202ENST00000409860 COL4A6Q14031 1691 aa22.33■■□□□ 1.16
C4orf48-202ENST00000409860 PTPRSQ13332 1948 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 LCHNA4D1U4 455 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 CARNS1A5YM72 827 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 LRRIQ3A6PVS8 624 aaPredicted RBP22.32■■□□□ 1.16
C4orf48-202ENST00000409860 STX10O60499 249 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 ZC3H11AO75152 810 aaKnown RBP eCLIP22.32■■□□□ 1.16
C4orf48-202ENST00000409860 TNNC2P02585 160 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 LAG3P18627 525 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 AP3M2P53677 418 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 MARSP56192 900 aaKnown RBP22.32■■□□□ 1.16
C4orf48-202ENST00000409860 SMAD3P84022 425 aaKnown RBP22.32■■□□□ 1.16
C4orf48-202ENST00000409860 DSC1Q08554 894 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 ZBTB6Q15916 424 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 DUOXA2Q1HG44 320 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 DCAF17Q5H9S7 520 aaPredicted RBP22.32■■□□□ 1.16
C4orf48-202ENST00000409860 TCERG1LQ5VWI1 586 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 LMBRD2Q68DH5 695 aaPredicted RBP22.32■■□□□ 1.16
C4orf48-202ENST00000409860 ZNF280BQ86YH2 543 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 DHX40Q8IX18 779 aaKnown RBP22.32■■□□□ 1.16
C4orf48-202ENST00000409860 PLEKHO2Q8TD55 490 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 C18orf25Q96B23 403 aaPredicted RBP22.32■■□□□ 1.16
C4orf48-202ENST00000409860 TMEM175Q9BSA9 504 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 NRDE2Q9H7Z3 1164 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 CBX8Q9HC52 389 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 AAASQ9NRG9 546 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 SAMSN1Q9NSI8 373 aaKnown RBP22.32■■□□□ 1.16
C4orf48-202ENST00000409860 INTS13Q9NVM9 706 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 TUBGCP4Q9UGJ1 667 aa22.32■■□□□ 1.16
C4orf48-202ENST00000409860 DDHD2O94830 711 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 CA3P07451 260 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 TRIM49P0CI25 452 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 TRIM49CP0CI26 452 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 MYOGP15173 224 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 TPM4P67936 248 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 NCAPHQ15003 741 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 NAB2Q15742 525 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 LRIT3Q3SXY7 679 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 COLGALT2Q8IYK4 626 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 UROC1Q96N76 676 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 POP1Q99575 1024 aaKnown RBP22.31■■□□□ 1.16
C4orf48-202ENST00000409860 MTMR12Q9C0I1 747 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 CWH43Q9H720 699 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 FANCLQ9NW38 375 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 HCSTQ9UBK5 93 aa22.31■■□□□ 1.16
C4orf48-202ENST00000409860 YBX2Q9Y2T7 364 aaKnown RBP22.31■■□□□ 1.16
C4orf48-202ENST00000409860 RALGAPA2Q2PPJ7 1873 aa22.3■■□□□ 1.16
C4orf48-202ENST00000409860 CITO14578 2027 aa22.3■■□□□ 1.16
C4orf48-202ENST00000409860 CASTOR2A6NHX0 329 aa22.3■■□□□ 1.16
C4orf48-202ENST00000409860 KCNJ18B7U540 433 aa22.3■■□□□ 1.16
C4orf48-202ENST00000409860 EEF1GP26641 437 aaKnown RBP22.3■■□□□ 1.16
C4orf48-202ENST00000409860 PBX2P40425 430 aa22.3■■□□□ 1.16
C4orf48-202ENST00000409860 MTIF2P46199 727 aaKnown RBP22.3■■□□□ 1.16
C4orf48-202ENST00000409860 MCCD1P59942 119 aaPredicted RBP22.3■■□□□ 1.16
C4orf48-202ENST00000409860 DLG4P78352 724 aa22.3■■□□□ 1.16
C4orf48-202ENST00000409860 CLDN10P78369 228 aa22.3■■□□□ 1.16
C4orf48-202ENST00000409860 SOX4Q06945 474 aaPredicted RBP22.3■■□□□ 1.16
C4orf48-202ENST00000409860 KCNJ12Q14500 433 aa22.3■■□□□ 1.16
C4orf48-202ENST00000409860 IQCB1Q15051 598 aa22.3■■□□□ 1.16
C4orf48-202ENST00000409860 HSP90AA4PQ58FG1 418 aa22.3■■□□□ 1.16
C4orf48-202ENST00000409860 IRF2BP1Q8IU81 584 aa22.3■■□□□ 1.16
C4orf48-202ENST00000409860 OR5B17Q8NGF7 314 aa22.3■■□□□ 1.16
C4orf48-202ENST00000409860 DDX27Q96GQ7 796 aaKnown RBP22.3■■□□□ 1.16
C4orf48-202ENST00000409860 DPP3Q9NY33 737 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms