RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 BRSK2Q8IWQ3 736 aa15.24■□□□□ 0.03
GYPC-203ENST00000409836 GOLGA5Q8TBA6 731 aa15.24■□□□□ 0.03
GYPC-203ENST00000409836 DDX27Q96GQ7 796 aaKnown RBP15.24■□□□□ 0.03
GYPC-203ENST00000409836 GSDMAQ96QA5 445 aa15.24■□□□□ 0.03
GYPC-203ENST00000409836 CDCA3Q99618 268 aaPredicted RBP15.24■□□□□ 0.03
GYPC-203ENST00000409836 PAAF1Q9BRP4 392 aa15.24■□□□□ 0.03
GYPC-203ENST00000409836 CBWD1Q9BRT8 395 aa15.24■□□□□ 0.03
GYPC-203ENST00000409836 GTPBP4Q9BZE4 634 aaKnown RBP15.24■□□□□ 0.03
GYPC-203ENST00000409836 KCTD10Q9H3F6 313 aa15.24■□□□□ 0.03
GYPC-203ENST00000409836 AGPAT3Q9NRZ7 376 aa15.24■□□□□ 0.03
GYPC-203ENST00000409836 CHST7Q9NS84 486 aa15.24■□□□□ 0.03
GYPC-203ENST00000409836 ADAM28Q9UKQ2 775 aa15.24■□□□□ 0.03
GYPC-203ENST00000409836 SF3B1O75533 1304 aaKnown RBP eCLIP15.23■□□□□ 0.039e-6■■■■■ 68.9
GYPC-203ENST00000409836 SCN1AP35498 2009 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 NT5C1B-RDH14C9J2C7 533 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 EXTL3O43909 919 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 LILRB3O75022 631 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 GADD45BO75293 160 aaPredicted RBP15.23■□□□□ 0.03
GYPC-203ENST00000409836 KIF4AO95239 1232 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 IL18RAPO95256 599 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 C1RP00736 705 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 HARSP12081 509 aaKnown RBP15.23■□□□□ 0.03
GYPC-203ENST00000409836 RPL9P32969 192 aaKnown RBP15.23■□□□□ 0.03
GYPC-203ENST00000409836 AARSP49588 968 aaKnown RBP eCLIP15.23■□□□□ 0.031e-6■■■■□ 20.6
GYPC-203ENST00000409836 OSTNP61366 133 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 SMC1AQ14683 1233 aaKnown RBP15.23■□□□□ 0.03
GYPC-203ENST00000409836 NFIL3Q16649 462 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 SEZ6Q53EL9 994 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 TCEAL5Q5H9L2 206 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 CD300LGQ6UXG3 332 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 SLC9A9Q8IVB4 645 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 SYCP3Q8IZU3 236 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 GUF1Q8N442 669 aaKnown RBP15.23■□□□□ 0.03
GYPC-203ENST00000409836 PPP2R3CQ969Q6 453 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 TCF25Q9BQ70 676 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 COLEC11Q9BWP8 271 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 RPF1Q9H9Y2 349 aaKnown RBP15.23■□□□□ 0.03
GYPC-203ENST00000409836 SLC39A2Q9NP94 309 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 UBQLN1Q9UMX0 589 aaKnown RBP15.23■□□□□ 0.03
GYPC-203ENST00000409836 COG5Q9UP83 839 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 PLXNA3P51805 1871 aa15.23■□□□□ 0.03
GYPC-203ENST00000409836 TTC28Q96AY4 2481 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 MTCL1Q9Y4B5 1905 aaKnown RBP15.22■□□□□ 0.03
GYPC-203ENST00000409836 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.22■□□□□ 0.03
GYPC-203ENST00000409836 C2orf71A6NGG8 1288 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 F8W810 466 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 KINO60870 393 aaKnown RBP15.22■□□□□ 0.03
GYPC-203ENST00000409836 MATR3P43243 847 aaKnown RBP eCLIP15.22■□□□□ 0.033e-6■■■■■ 30.1
GYPC-203ENST00000409836 OR1G1P47890 313 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 HYAL1Q12794 435 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 ELAVL2Q12926 359 aaKnown RBP15.22■□□□□ 0.03
GYPC-203ENST00000409836 MYBPC2Q14324 1141 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 PTPN14Q15678 1187 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 DUSP6Q16828 381 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 SPATA1Q5VX52 437 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 ARMCX5Q6P1M9 558 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 FUT10Q6P4F1 479 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 HS2ST1Q7LGA3 356 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 VPS52Q8N1B4 723 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 GPD1LQ8N335 351 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 EFHBQ8N7U6 833 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 MRPL43Q8N983 215 aaKnown RBP15.22■□□□□ 0.03
GYPC-203ENST00000409836 CCDC47Q96A33 483 aaKnown RBP15.22■□□□□ 0.03
GYPC-203ENST00000409836 PABPC5Q96DU9 382 aaKnown RBP15.22■□□□□ 0.03
GYPC-203ENST00000409836 KIAA1586Q9HCI6 787 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 RMND1Q9NWS8 449 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 HOOK1Q9UJC3 728 aaKnown RBP15.22■□□□□ 0.03
GYPC-203ENST00000409836 TRAF3IP3Q9Y228 551 aa15.22■□□□□ 0.03
GYPC-203ENST00000409836 PRG3Q9Y2Y8 225 aaPredicted RBP15.22■□□□□ 0.03
GYPC-203ENST00000409836 CASTOR2A6NHX0 329 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 LACTBL1A8MY62 500 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 PDXKO00764 312 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 XPOTO43592 962 aaKnown RBP15.21■□□□□ 0.03
GYPC-203ENST00000409836 KIF20AO95235 890 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 PAX3P23760 479 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 ACOT2P49753 483 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 DSG1Q02413 1049 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 PNOCQ13519 176 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 ZCWPW2Q504Y3 356 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 DCLRE1AQ6PJP8 1040 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 TMEM184AQ6ZMB5 413 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 ADGRD2Q7Z7M1 963 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 C3orf58Q8NDZ4 430 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 DMAC2Q9NW81 257 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 HSPBP1Q9NZL4 362 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 CACNG4Q9UBN1 327 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 TUBGCP4Q9UGJ1 667 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 SSX2IPQ9Y2D8 614 aa15.21■□□□□ 0.03
GYPC-203ENST00000409836 ANO9A1A5B4 782 aa15.2■□□□□ 0.02
GYPC-203ENST00000409836 SMC2O95347 1197 aa15.2■□□□□ 0.02
GYPC-203ENST00000409836 PAPLNO95428 1278 aa15.2■□□□□ 0.02
GYPC-203ENST00000409836 GLP2RO95838 553 aa15.2■□□□□ 0.02
GYPC-203ENST00000409836 NFICP08651 508 aa15.2■□□□□ 0.02
GYPC-203ENST00000409836 GLUD2P49448 558 aa15.2■□□□□ 0.02
GYPC-203ENST00000409836 CLCNKBP51801 687 aa15.2■□□□□ 0.02
GYPC-203ENST00000409836 MCCD1P59942 119 aaPredicted RBP15.2■□□□□ 0.02
GYPC-203ENST00000409836 CREMQ03060 361 aa15.2■□□□□ 0.02
GYPC-203ENST00000409836 BMS1Q14692 1282 aaKnown RBP15.2■□□□□ 0.02
GYPC-203ENST00000409836 KIAA0319Q5VV43 1072 aa15.2■□□□□ 0.02
GYPC-203ENST00000409836 JADE1Q6IE81 842 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms