RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 NUGGCQ68CJ6 796 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 TMC7Q7Z402 723 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 CCDC51Q96ER9 411 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 SENP2Q9HC62 589 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 PITPNM2Q9BZ72 1349 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 SAMD9Q5K651 1589 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 SCAMP3O14828 347 aaKnown RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 CIAO1O76071 339 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 ZSCAN26Q16670 478 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 MIB1Q86YT6 1006 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 SRRM1Q8IYB3 904 aaKnown RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 GPRC5AQ8NFJ5 357 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 CEP70Q8NHQ1 597 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 ZNF564Q8TBZ8 553 aaPredicted RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 TMA16Q96EY4 203 aaKnown RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 PGLYRP2Q96PD5 576 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 SMARCAD1Q9H4L7 1026 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 AOX1Q06278 1338 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 RNF103-CHMP3A0A140T963 221 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 PCNAP12004 261 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 TNNI3P19429 210 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 COG2Q14746 738 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 NFIXQ14938 502 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 SNCBQ16143 134 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 INPP5DQ92835 1189 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 PI4K2AQ9BTU6 479 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 KIFC3Q9BVG8 833 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 ADNPQ9H2P0 1102 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 MTMR6Q9Y217 621 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 APOBEC2Q9Y235 224 aaKnown RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 ENO2P09104 434 aaPredicted RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 ZNF286BP0CG31 522 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 TDRD10Q5VZ19 366 aaKnown RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 NDST4Q9H3R1 872 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 STN1Q9H668 368 aaKnown RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 SLC30A1Q9Y6M5 507 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 PIK3C2GO75747 1445 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 GH1P01241 217 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 HPGDP15428 266 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 CLIP3Q96DZ5 547 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 FAM81BQ96LP2 452 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 AAASQ9NRG9 546 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 RNF19AQ9NV58 838 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 H2AFY2Q9P0M6 372 aaPredicted RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 SCINQ9Y6U3 715 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 UTYO14607 1347 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 AATKQ6ZMQ8 1374 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 PDHA1P08559 390 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 SLFN14P0C7P3 912 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 PDIA2Q13087 525 aaKnown RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 QRICH1Q2TAL8 776 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 ZBED8Q8IZ13 594 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 FBXO18Q8NFZ0 1043 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 GGT7Q9UJ14 662 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 CYP26A1O43174 497 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 NCK2O43639 380 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 FKBP9O95302 570 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 AKR1B1P15121 316 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 ITGB6P18564 788 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 NMT1P30419 496 aaKnown RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 COASYQ13057 564 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 ZBTB17Q13105 803 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 FUT11Q495W5 492 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 FKBP9P1Q75LS8 142 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 OXER1Q8TDS5 423 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 BTBD6Q96KE9 485 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 C17orf80Q9BSJ5 609 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 ZNRF3Q9ULT6 936 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 TSPAN3O60637 253 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 CYP2C9P11712 490 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 EIF3EP60228 445 aaKnown RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 KCNH2Q12809 1159 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 E4F1Q66K89 784 aaPredicted RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 IFNEQ86WN2 208 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 TMEM2Q9UHN6 1383 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 CAPN1P07384 714 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 MLNP12872 115 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 DEPDC1Q5TB30 811 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 RAB23Q9ULC3 237 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 IGSF1Q8N6C5 1336 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 NUP160Q12769 1436 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 MED8Q96G25 268 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 CHORDC1Q9UHD1 332 aaPredicted RBP8.85□□□□□ -0.99
SCN9A-203ENST00000409672 HMGXB3Q12766 1538 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 NUDT14O95848 222 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 RALBP11234 206 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 TYK2P29597 1187 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 DOK6Q6PKX4 331 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 GPD1LQ8N335 351 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 CCDC3Q9BQI4 270 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 STARD7Q9NQZ5 370 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 MROH7-TTC4A0A0A0MT08 1334 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 C17orf102A2RUQ5 167 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 DDI1Q8WTU0 396 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 NARFQ9UHQ1 456 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 B3GAT3O94766 335 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 AKAP5P24588 427 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 GUCA1AP43080 201 aaPredicted RBP8.85□□□□□ -0.99
SCN9A-203ENST00000409672 DRAP1Q14919 205 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms