RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 XPOTO43592 962 aaKnown RBP18.02■□□□□ 0.48
SUMO1-208ENST00000409627 NFICP08651 508 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 KRT13P13646 458 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 ZNF165P49910 485 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 MARSP56192 900 aaKnown RBP18.02■□□□□ 0.48
SUMO1-208ENST00000409627 RNASELQ05823 741 aaKnown RBP18.02■□□□□ 0.48
SUMO1-208ENST00000409627 DSC1Q08554 894 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 BFSP1Q12934 665 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 TMEM132DQ14C87 1099 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 NAB2Q15742 525 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 RAB30Q15771 203 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 ZBTB6Q15916 424 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 JADE1Q6IE81 842 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 FRMD5Q7Z6J6 570 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 USP37Q86T82 979 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 WDR49Q8IV35 697 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 EFCAB13Q8IY85 973 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 PLEKHO2Q8TD55 490 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 PARD3BQ8TEW8 1205 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 KIF12Q96FN5 646 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 FNBP1Q96RU3 617 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 CGRRF1Q99675 332 aa18.02■□□□□ 0.48
SUMO1-208ENST00000409627 UBQLN1Q9UMX0 589 aaKnown RBP18.02■□□□□ 0.48
SUMO1-208ENST00000409627 CYP3A5P20815 502 aa18.01■□□□□ 0.47
SUMO1-208ENST00000409627 VAMP7P51809 220 aa18.01■□□□□ 0.47
SUMO1-208ENST00000409627 CLDN10P78369 228 aa18.01■□□□□ 0.47
SUMO1-208ENST00000409627 SMAD3P84022 425 aaKnown RBP18.01■□□□□ 0.47
SUMO1-208ENST00000409627 SPAG1Q07617 926 aa18.01■□□□□ 0.47
SUMO1-208ENST00000409627 NCAPHQ15003 741 aa18.01■□□□□ 0.47
SUMO1-208ENST00000409627 LRIT3Q3SXY7 679 aa18.01■□□□□ 0.47
SUMO1-208ENST00000409627 CCDC40Q4G0X9 1142 aa18.01■□□□□ 0.47
SUMO1-208ENST00000409627 FAM114A1Q8IWE2 563 aa18.01■□□□□ 0.47
SUMO1-208ENST00000409627 FIBCD1Q8N539 461 aa18.01■□□□□ 0.47
SUMO1-208ENST00000409627 AOPEPQ8N6M6 819 aa18.01■□□□□ 0.47
SUMO1-208ENST00000409627 CCDC127Q96BQ5 260 aa18.01■□□□□ 0.47
SUMO1-208ENST00000409627 PBX4Q9BYU1 374 aa18.01■□□□□ 0.47
SUMO1-208ENST00000409627 TSPY26PQ9H489 355 aa18.01■□□□□ 0.47
SUMO1-208ENST00000409627 CWH43Q9H720 699 aa18.01■□□□□ 0.47
SUMO1-208ENST00000409627 ARMCX3Q9UH62 379 aaPredicted RBP18.01■□□□□ 0.47
SUMO1-208ENST00000409627 MRPL42Q9Y6G3 142 aaKnown RBP18.01■□□□□ 0.47
SUMO1-208ENST00000409627 LCHNA4D1U4 455 aa18■□□□□ 0.47
SUMO1-208ENST00000409627 LRRIQ3A6PVS8 624 aaPredicted RBP18■□□□□ 0.47
SUMO1-208ENST00000409627 SMTNL1A8MU46 457 aa18■□□□□ 0.47
SUMO1-208ENST00000409627 DDHD2O94830 711 aa18■□□□□ 0.47
SUMO1-208ENST00000409627 DLATP10515 647 aaKnown RBP18■□□□□ 0.47
SUMO1-208ENST00000409627 TUSC3Q13454 348 aa18■□□□□ 0.47
SUMO1-208ENST00000409627 IQCB1Q15051 598 aa18■□□□□ 0.47
SUMO1-208ENST00000409627 ZNF280BQ86YH2 543 aa18■□□□□ 0.47
SUMO1-208ENST00000409627 IRF2BP1Q8IU81 584 aa18■□□□□ 0.47
SUMO1-208ENST00000409627 DHX40Q8IX18 779 aaKnown RBP18■□□□□ 0.47
SUMO1-208ENST00000409627 COLGALT2Q8IYK4 626 aa18■□□□□ 0.47
SUMO1-208ENST00000409627 BEST2Q8NFU1 509 aa18■□□□□ 0.47
SUMO1-208ENST00000409627 CNOT6LQ96LI5 555 aaKnown RBP18■□□□□ 0.47
SUMO1-208ENST00000409627 FAM193BQ96PV7 902 aaPredicted RBP18■□□□□ 0.47
SUMO1-208ENST00000409627 TMEM175Q9BSA9 504 aa18■□□□□ 0.47
SUMO1-208ENST00000409627 ANP32EQ9BTT0 268 aa18■□□□□ 0.47
SUMO1-208ENST00000409627 NRDE2Q9H7Z3 1164 aa18■□□□□ 0.47
SUMO1-208ENST00000409627 INTS13Q9NVM9 706 aa18■□□□□ 0.47
SUMO1-208ENST00000409627 MSRAQ9UJ68 235 aa18■□□□□ 0.47
SUMO1-208ENST00000409627 PTPRJQ12913 1337 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 CARNS1A5YM72 827 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 B4GALT3O60512 393 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 TMEM191BP0C7N4 346 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 LINC00271P0C7V0 271 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 MYOGP15173 224 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 LAG3P18627 525 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 TNNI1P19237 187 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 PBX2P40425 430 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 AP3M2P53677 418 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 DLG4P78352 724 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 TFAMQ00059 246 aaKnown RBP17.99■□□□□ 0.47
SUMO1-208ENST00000409627 SOX4Q06945 474 aaPredicted RBP17.99■□□□□ 0.47
SUMO1-208ENST00000409627 CDKAL1Q5VV42 579 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 FAM200AQ8TCP9 573 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 CACTINQ8WUQ7 758 aaKnown RBP17.99■□□□□ 0.47
SUMO1-208ENST00000409627 CLP1Q92989 425 aaKnown RBP17.99■□□□□ 0.47
SUMO1-208ENST00000409627 C18orf25Q96B23 403 aaPredicted RBP17.99■□□□□ 0.47
SUMO1-208ENST00000409627 UROC1Q96N76 676 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 CBX8Q9HC52 389 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 SAMSN1Q9NSI8 373 aaKnown RBP17.99■□□□□ 0.47
SUMO1-208ENST00000409627 HCSTQ9UBK5 93 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 TUBGCP4Q9UGJ1 667 aa17.99■□□□□ 0.47
SUMO1-208ENST00000409627 YBX2Q9Y2T7 364 aaKnown RBP17.99■□□□□ 0.47
SUMO1-208ENST00000409627 LINC01553A4QN01 128 aa17.98■□□□□ 0.47
SUMO1-208ENST00000409627 ZC3H11AO75152 810 aaKnown RBP eCLIP17.98■□□□□ 0.47
SUMO1-208ENST00000409627 CA3P07451 260 aa17.98■□□□□ 0.47
SUMO1-208ENST00000409627 LRPAP1P30533 357 aa17.98■□□□□ 0.47
SUMO1-208ENST00000409627 DUOXA2Q1HG44 320 aa17.98■□□□□ 0.47
SUMO1-208ENST00000409627 C1orf220Q5T0J3 134 aa17.98■□□□□ 0.47
SUMO1-208ENST00000409627 TRIM59Q8IWR1 403 aa17.98■□□□□ 0.47
SUMO1-208ENST00000409627 ANKRD36BP1Q96IX9 119 aa17.98■□□□□ 0.47
SUMO1-208ENST00000409627 POP1Q99575 1024 aaKnown RBP17.98■□□□□ 0.47
SUMO1-208ENST00000409627 MTMR12Q9C0I1 747 aa17.98■□□□□ 0.47
SUMO1-208ENST00000409627 FANCLQ9NW38 375 aa17.98■□□□□ 0.47
SUMO1-208ENST00000409627 MAGEC2Q9UBF1 373 aaPredicted RBP17.98■□□□□ 0.47
SUMO1-208ENST00000409627 DNAJB4Q9UDY4 337 aa17.98■□□□□ 0.47
SUMO1-208ENST00000409627 RWDD3Q9Y3V2 267 aa17.98■□□□□ 0.47
SUMO1-208ENST00000409627 BECN2A8MW95 431 aa17.97■□□□□ 0.47
SUMO1-208ENST00000409627 TULP1O00294 542 aaPredicted RBP17.97■□□□□ 0.47
SUMO1-208ENST00000409627 STX10O60499 249 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms