RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 CDKL5O76039 1030 aa18.67■□□□□ 0.58
SCRN1-203ENST00000409570 NR5A1Q13285 461 aa18.67■□□□□ 0.58
SCRN1-203ENST00000409570 SLC5A9Q2M3M2 681 aa18.67■□□□□ 0.58
SCRN1-203ENST00000409570 RTL10Q7L3V2 364 aa18.67■□□□□ 0.58
SCRN1-203ENST00000409570 NOSTRINQ8IVI9 506 aa18.67■□□□□ 0.58
SCRN1-203ENST00000409570 TNFRSF25Q93038 417 aa18.67■□□□□ 0.58
SCRN1-203ENST00000409570 SECISBP2LQ93073 1101 aaKnown RBP18.67■□□□□ 0.58
SCRN1-203ENST00000409570 TTC12Q9H892 705 aaPredicted RBP18.67■□□□□ 0.58
SCRN1-203ENST00000409570 HEBP1Q9NRV9 189 aa18.67■□□□□ 0.58
SCRN1-203ENST00000409570 PRR5-ARHGAP8B1AHC4 643 aa18.66■□□□□ 0.58
SCRN1-203ENST00000409570 TMEM189-UBE2V1I3L0A0 370 aa18.66■□□□□ 0.58
SCRN1-203ENST00000409570 NCAM2O15394 837 aa18.66■□□□□ 0.58
SCRN1-203ENST00000409570 EDN1P05305 212 aa18.66■□□□□ 0.58
SCRN1-203ENST00000409570 RHOP08100 348 aa18.66■□□□□ 0.58
SCRN1-203ENST00000409570 XRCC6P12956 609 aaKnown RBP eCLIP18.66■□□□□ 0.58
SCRN1-203ENST00000409570 ARHGAP8P85298 464 aa18.66■□□□□ 0.58
SCRN1-203ENST00000409570 LMNB2Q03252 620 aa18.66■□□□□ 0.58
SCRN1-203ENST00000409570 CALCRLQ16602 461 aa18.66■□□□□ 0.58
SCRN1-203ENST00000409570 TANGO2Q6ICL3 276 aa18.66■□□□□ 0.58
SCRN1-203ENST00000409570 CD300LGQ6UXG3 332 aa18.66■□□□□ 0.58
SCRN1-203ENST00000409570 ZBTB8OSQ8IWT0 167 aa18.66■□□□□ 0.58
SCRN1-203ENST00000409570 GDE1Q9NZC3 331 aa18.66■□□□□ 0.58
SCRN1-203ENST00000409570 USP20Q9Y2K6 914 aa18.66■□□□□ 0.58
SCRN1-203ENST00000409570 CDY1Q9Y6F8 540 aa18.66■□□□□ 0.58
SCRN1-203ENST00000409570 WNT7AO00755 349 aa18.65■□□□□ 0.58
SCRN1-203ENST00000409570 TBC1D4O60343 1298 aa18.65■□□□□ 0.58
SCRN1-203ENST00000409570 CEBPBP17676 345 aa18.65■□□□□ 0.58
SCRN1-203ENST00000409570 ADCY1Q08828 1119 aa18.65■□□□□ 0.58
SCRN1-203ENST00000409570 MTAPQ13126 283 aa18.65■□□□□ 0.58
SCRN1-203ENST00000409570 EEF1DP3Q658K8 133 aa18.65■□□□□ 0.58
SCRN1-203ENST00000409570 ZNF852Q6ZMS4 543 aa18.65■□□□□ 0.58
SCRN1-203ENST00000409570 ZNF687Q8N1G0 1237 aa18.65■□□□□ 0.58
SCRN1-203ENST00000409570 BSNDQ8WZ55 320 aa18.65■□□□□ 0.58
SCRN1-203ENST00000409570 PARD6AQ9NPB6 346 aa18.65■□□□□ 0.58
SCRN1-203ENST00000409570 AVENQ9NQS1 362 aaPredicted RBP18.65■□□□□ 0.58
SCRN1-203ENST00000409570 PDRG1Q9NUG6 133 aa18.65■□□□□ 0.58
SCRN1-203ENST00000409570 CDV3Q9UKY7 258 aaKnown RBP18.65■□□□□ 0.58
SCRN1-203ENST00000409570 USP18Q9UMW8 372 aa18.65■□□□□ 0.58
SCRN1-203ENST00000409570 BACE2Q9Y5Z0 518 aa18.65■□□□□ 0.58
SCRN1-203ENST00000409570 CNOT1A5YKK6 2376 aaKnown RBP18.64■□□□□ 0.58
SCRN1-203ENST00000409570 EPB41L2O43491 1005 aaKnown RBP18.64■□□□□ 0.57
SCRN1-203ENST00000409570 CTDNEP1O95476 244 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 PRKCBP05771 671 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 SPATA31C1P0DKV0 1188 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 TDGF1P13385 188 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 TKTP29401 623 aaKnown RBP18.64■□□□□ 0.57
SCRN1-203ENST00000409570 KRT2P35908 639 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 TXKP42681 527 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 RBM25P49756 843 aaKnown RBP18.64■□□□□ 0.57
SCRN1-203ENST00000409570 PRPF4BQ13523 1007 aaKnown RBP18.64■□□□□ 0.57
SCRN1-203ENST00000409570 MCPH1Q8NEM0 835 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 DNASE1L2Q92874 299 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 ELSPBP1Q96BH3 223 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 DDX27Q96GQ7 796 aaKnown RBP18.64■□□□□ 0.57
SCRN1-203ENST00000409570 PPP1R10Q96QC0 940 aaKnown RBP18.64■□□□□ 0.57
SCRN1-203ENST00000409570 MTMR9Q96QG7 549 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 ADPGKQ9BRR6 497 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 RTKNQ9BST9 563 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 FAM126AQ9BYI3 521 aaPredicted RBP18.64■□□□□ 0.57
SCRN1-203ENST00000409570 CCDC113Q9H0I3 377 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 C2orf40Q9H1Z8 148 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 MRPS17Q9Y2R5 130 aaKnown RBP18.64■□□□□ 0.57
SCRN1-203ENST00000409570 GDAQ9Y2T3 454 aa18.64■□□□□ 0.57
SCRN1-203ENST00000409570 DCDC2BA2VCK2 349 aa18.63■□□□□ 0.57
SCRN1-203ENST00000409570 ACKR2O00590 384 aa18.63■□□□□ 0.57
SCRN1-203ENST00000409570 PFKFB2O60825 505 aa18.63■□□□□ 0.57
SCRN1-203ENST00000409570 B3GAT3O94766 335 aa18.63■□□□□ 0.57
SCRN1-203ENST00000409570 ATP2B1P20020 1258 aa18.63■□□□□ 0.57
SCRN1-203ENST00000409570 FCARP24071 287 aa18.63■□□□□ 0.57
SCRN1-203ENST00000409570 CLCNKBP51801 687 aa18.63■□□□□ 0.57
SCRN1-203ENST00000409570 MAPK6Q16659 721 aa18.63■□□□□ 0.57
SCRN1-203ENST00000409570 TMEM132AQ24JP5 1023 aa18.63■□□□□ 0.57
SCRN1-203ENST00000409570 GLRA4Q5JXX5 417 aa18.63■□□□□ 0.57
SCRN1-203ENST00000409570 PRSS36Q5K4E3 855 aa18.63■□□□□ 0.57
SCRN1-203ENST00000409570 C3orf58Q8NDZ4 430 aa18.63■□□□□ 0.57
SCRN1-203ENST00000409570 ORC3Q9UBD5 711 aaPredicted RBP18.63■□□□□ 0.57
SCRN1-203ENST00000409570 ARHGEF37A1IGU5 675 aa18.62■□□□□ 0.57
SCRN1-203ENST00000409570 I3L4J1 428 aa18.62■□□□□ 0.57
SCRN1-203ENST00000409570 NRG2O14511 850 aaPredicted RBP18.62■□□□□ 0.57
SCRN1-203ENST00000409570 NEMFO60524 1076 aa18.62■□□□□ 0.57
SCRN1-203ENST00000409570 PTPN2P17706 415 aa18.62■□□□□ 0.57
SCRN1-203ENST00000409570 BRCC3P46736 316 aa18.62■□□□□ 0.57
SCRN1-203ENST00000409570 GRM2Q14416 872 aa18.62■□□□□ 0.57
SCRN1-203ENST00000409570 UPP1Q16831 310 aa18.62■□□□□ 0.57
SCRN1-203ENST00000409570 ANKS3Q6ZW76 656 aa18.62■□□□□ 0.57
SCRN1-203ENST00000409570 CHRDQ9H2X0 955 aa18.62■□□□□ 0.57
SCRN1-203ENST00000409570 GOLGA2P5Q9HBQ8 144 aa18.62■□□□□ 0.57
SCRN1-203ENST00000409570 GMEB2Q9UKD1 530 aa18.62■□□□□ 0.57
SCRN1-203ENST00000409570 TPCN1Q9ULQ1 816 aa18.62■□□□□ 0.57
SCRN1-203ENST00000409570 NDRG2Q9UN36 371 aaKnown RBP18.62■□□□□ 0.57
SCRN1-203ENST00000409570 MED24O75448 989 aa18.61■□□□□ 0.57
SCRN1-203ENST00000409570 ABLIM3O94929 683 aa18.61■□□□□ 0.57
SCRN1-203ENST00000409570 FDPSP14324 419 aaKnown RBP18.61■□□□□ 0.57
SCRN1-203ENST00000409570 LIG1P18858 919 aa18.61■□□□□ 0.57
SCRN1-203ENST00000409570 ROR1Q01973 937 aa18.61■□□□□ 0.57
SCRN1-203ENST00000409570 DCAF4L1Q3SXM0 396 aa18.61■□□□□ 0.57
SCRN1-203ENST00000409570 SLC8B1Q6J4K2 584 aa18.61■□□□□ 0.57
SCRN1-203ENST00000409570 MAMSTRQ6ZN01 415 aa18.61■□□□□ 0.57
SCRN1-203ENST00000409570 CATSPER3Q86XQ3 398 aa18.61■□□□□ 0.57
SCRN1-203ENST00000409570 ZNF461Q8TAF7 563 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms