RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 ADAMTS13Q76LX8 1427 aa26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 SKIP12755 728 aa26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 GTF2H3Q13889 308 aa26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 RCOR2Q8IZ40 523 aa26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 AGLP35573 1532 aa26.46■■□□□ 1.83
SPIRE1-202ENST00000409402 ANO4Q32M45 955 aa26.45■■□□□ 1.83
SPIRE1-202ENST00000409402 CCDC138Q96M89 665 aa26.45■■□□□ 1.83
SPIRE1-202ENST00000409402 MYO1DO94832 1006 aa26.45■■□□□ 1.83
SPIRE1-202ENST00000409402 RHOBTB3O94955 611 aa26.45■■□□□ 1.83
SPIRE1-202ENST00000409402 LUC7L3O95232 432 aaKnown RBP26.45■■□□□ 1.83
SPIRE1-202ENST00000409402 ACADSBP45954 432 aa26.45■■□□□ 1.83
SPIRE1-202ENST00000409402 GCLCP48506 637 aaPredicted RBP26.45■■□□□ 1.83
SPIRE1-202ENST00000409402 TRIM45Q9H8W5 580 aaPredicted RBP26.45■■□□□ 1.83
SPIRE1-202ENST00000409402 A0A0G2JND7 137 aa26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 RFX5P48382 616 aaPredicted RBP26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 SENP7Q9BQF6 1050 aa26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 CPS1P31327 1500 aa26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 PSMD3O43242 534 aa26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 EXTL3O43909 919 aa26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 NPTXRO95502 500 aa26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 POLLQ9UGP5 575 aa26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 L3MBTL1Q9Y468 752 aa26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 ZNF197O14709 1029 aa26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 GAS2O43903 313 aaKnown RBP26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 DCTN3O75935 186 aa26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 STAG3L1P0CL83 205 aa26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 RPA1P27694 616 aa26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 LIMA1Q9UHB6 759 aaKnown RBP26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 PIK3C2BO00750 1634 aa26.45■■□□□ 1.82
SPIRE1-202ENST00000409402 MYMKA6NI61 221 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 CLCN6P51797 869 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 DPYDQ12882 1025 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 ADSSL1Q8N142 457 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 C1orf54Q8WWF1 131 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 CPSF2Q9P2I0 782 aaKnown RBP26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 PGBD3Q8N328 593 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 PRMT6Q96LA8 375 aaPredicted RBP26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 DDX47Q9H0S4 455 aaKnown RBP26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 ASMTLO95671 621 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 IZUMO3Q5VZ72 239 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 ATPAF2Q8N5M1 289 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 SYT2Q8N9I0 419 aaPredicted RBP26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 TSSK1BQ9BXA7 367 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 ATP9BO43861 1147 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 FBXO41Q8TF61 875 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 CPA5Q8WXQ8 436 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 UVRAGQ9P2Y5 699 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 PPARGC1AQ9UBK2 798 aaKnown RBP26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 TRIM33Q9UPN9 1127 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 BCORL1Q5H9F3 1711 aa26.44■■□□□ 1.82
SPIRE1-202ENST00000409402 ALDH1A3P47895 512 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 ARHGDIAP52565 204 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 ANTXR2P58335 489 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 ZDHHC15Q96MV8 337 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 C3orf70A6NLC5 250 aaPredicted RBP26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 PPFIA2O75334 1257 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 EDRF1Q3B7T1 1238 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 ADGRG1Q9Y653 693 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 KLRK1P26718 216 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 PNPLA4P41247 253 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 CAPRIN1Q14444 709 aaKnown RBP26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 TSR3Q9UJK0 312 aaKnown RBP26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 MMEP08473 750 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 ARSEP51690 589 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 CENPKQ9BS16 269 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 MUC3BQ9H195 1237 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 MROH8Q9H579 483 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 PPP2R3BQ9Y5P8 575 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 IRF1P10914 325 aa26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 FXR2P51116 673 aaKnown RBP eCLIP26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 GBA2Q9HCG7 927 aaPredicted RBP26.43■■□□□ 1.82
SPIRE1-202ENST00000409402 MAD2L2Q9UI95 211 aa26.42■■□□□ 1.82
SPIRE1-202ENST00000409402 EPB41L3Q9Y2J2 1087 aaPredicted RBP26.42■■□□□ 1.82
SPIRE1-202ENST00000409402 ACTR2P61160 394 aa26.42■■□□□ 1.82
SPIRE1-202ENST00000409402 SPATA17Q96L03 361 aa26.42■■□□□ 1.82
SPIRE1-202ENST00000409402 THPOP40225 353 aa26.42■■□□□ 1.82
SPIRE1-202ENST00000409402 NLRP11P59045 1033 aaKnown RBP26.42■■□□□ 1.82
SPIRE1-202ENST00000409402 DHX34Q14147 1143 aaKnown RBP26.42■■□□□ 1.82
SPIRE1-202ENST00000409402 RBBP7Q16576 425 aa26.42■■□□□ 1.82
SPIRE1-202ENST00000409402 KCNN4O15554 427 aa26.42■■□□□ 1.82
SPIRE1-202ENST00000409402 MDM2Q00987 491 aaPredicted RBP26.42■■□□□ 1.82
SPIRE1-202ENST00000409402 TMEM8AQ9HCN3 771 aa26.42■■□□□ 1.82
SPIRE1-202ENST00000409402 HLA-DRAP01903 254 aa26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 CHGBP05060 677 aa26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 BACE1P56817 501 aa26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 ZC2HC1CQ53FD0 456 aaPredicted RBP26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 THEGQ9P2T0 379 aa26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 HSP90AA5PQ58FG0 334 aa26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 ZBTB41Q5SVQ8 909 aa26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 IL31Q6EBC2 164 aa26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 POLR3CQ9BUI4 534 aaPredicted RBP26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 ARHGAP15Q53QZ3 475 aa26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 SLC30A5Q8TAD4 765 aa26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 UBE2Q2Q8WVN8 375 aa26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 MRPL46Q9H2W6 279 aaKnown RBP26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 CEMIPQ8WUJ3 1361 aa26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 EEF2KO00418 725 aaKnown RBP26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 ALDH7A1P49419 539 aaKnown RBP26.41■■□□□ 1.82
SPIRE1-202ENST00000409402 DEUP1Q05D60 604 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms