RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 CEP120Q8N960 986 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 SLAIN1Q8ND83 568 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 FBXO32Q969P5 355 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 SKA1Q96BD8 255 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 DDX27Q96GQ7 796 aaKnown RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 POLR3CQ9BUI4 534 aaPredicted RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 AGO4Q9HCK5 861 aaKnown RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 RSPH14Q9UHP6 348 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 FIS1Q9Y3D6 152 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 NEURL4Q96JN8 1562 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 GSTA4O15217 222 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 FTCDO95954 541 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 ADCYAP1R1P41586 468 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 ROR1Q01973 937 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 STARD3Q14849 445 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 DRAP1Q14919 205 aaPredicted RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 KRT31Q15323 416 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 MPZL3Q6UWV2 235 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 TRIM67Q6ZTA4 783 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 CHSY1Q86X52 802 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 RIOX2Q8IUF8 465 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 FIBCD1Q8N539 461 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 ZNF564Q8TBZ8 553 aaPredicted RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 FOPNLQ96NB1 174 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 TINF2Q9BSI4 451 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 IDI2Q9BXS1 227 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 ZNF541Q9H0D2 1346 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 CYB561D2O14569 222 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 MSH4O15457 936 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 B3GAT3O94766 335 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 TGFB3P10600 412 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 GHRP10912 638 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 CDC25BP30305 580 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 AKT1P31749 480 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 ZNF177Q13360 481 aaPredicted RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 TMED2Q15363 201 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 GLRA4Q5JXX5 417 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 OOSP2Q86WS3 158 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 TRIM42Q8IWZ5 723 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 MRFAP1L1Q96HT8 127 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 CENPKQ9BS16 269 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 HAUS8Q9BT25 410 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 VCXQ9H320 206 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 C17orf75Q9HAS0 396 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 FAM49BQ9NUQ9 324 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 CFAP69A5D8W1 941 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 F5H423 210 aaPredicted RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 PSMD3O43242 534 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 TLL1O43897 1013 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 ITGB3P05106 788 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 SLC2A3P11169 496 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 FGFR2P21802 821 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 MAP4P27816 1152 aaKnown RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 PRCPP42785 496 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 NAMPTP43490 491 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 PRKCQQ04759 706 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 PTK2BQ14289 1009 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 SLMAPQ14BN4 828 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 ALKBH5Q6P6C2 394 aaKnown RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 PPHLN1Q8NEY8 458 aaKnown RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 SYTL5Q8TDW5 730 aaPredicted RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 CDK5RAP1Q96SZ6 601 aaKnown RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 EGFL8Q99944 293 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 TRIM45Q9H8W5 580 aaPredicted RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 CYP4F11Q9HBI6 524 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 EVA1BQ9NVM1 165 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 KIF20BQ96Q89 1820 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 RICTORQ6R327 1708 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 CNTNAP5Q8WYK1 1306 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 PITPNM2Q9BZ72 1349 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 C3P01024 1663 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 IRF6O14896 467 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 ZW10O43264 779 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 RNF40O75150 1001 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 CKMP06732 381 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 GRK4P32298 578 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 PRAMEP78395 509 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 DEUP1Q05D60 604 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 SEMA3FQ13275 785 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 CUL4AQ13619 759 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 BBS9Q3SYG4 887 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 RABGAP1LQ5R372 815 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 SZRD1Q7Z422 152 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 VSIG1Q86XK7 387 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 CARNMT1Q8N4J0 409 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 UHMK1Q8TAS1 419 aaKnown RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 HASPINQ8TF76 798 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 OSMRQ99650 979 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 NFIBO00712 420 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 RALBP11234 206 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 AXLP30530 894 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 SHMT1P34896 483 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 HADHAP40939 763 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 EXOSC10Q01780 885 aaKnown RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 LLGL1Q15334 1064 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 SH2D4BQ5SQS7 431 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 C11orf57Q6ZUT1 292 aaPredicted RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 CENPUQ71F23 418 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms