RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 CC2D1AQ6P1N0 951 aaPredicted RBP4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 CRELD2Q6UXH1 353 aaPredicted RBP4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 SLC47A2Q86VL8 602 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 RPUSD2Q8IZ73 545 aaKnown RBP4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 ANKLE1Q8NAG6 615 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 MSANTD4Q8NCY6 345 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 TPCN2Q8NHX9 752 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 HELQQ8TDG4 1101 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 MORC4Q8TE76 937 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 TCP11Q8WWU5 503 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 DHX38Q92620 1227 aaKnown RBP4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 TAF4BQ92750 862 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 VTI1AQ96AJ9 217 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 RPGRIP1Q96KN7 1286 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 NLRP4Q96MN2 994 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 SYT11Q9BT88 431 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 RNPEPQ9H4A4 650 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 OSGEPQ9NPF4 335 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 RBAKQ9NYW8 714 aaPredicted RBP4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 OGFRQ9NZT2 677 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 SUCLA2Q9P2R7 463 aaPredicted RBP4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 NENFQ9UMX5 172 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 LOC285556D6RIA3 1793 aa4.29□□□□□ -1.72
LRRTM4-201ENST00000409088 PAPPA2Q9BXP8 1791 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 WDR81Q562E7 1941 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 A0A0B4J269 797 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 CCDC151A5D8V7 595 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 BTNL10A8MVZ5 291 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ZBTB42B2RXF5 422 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 INO80B-WBP1J3KQ70 363 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 KCNK3O14649 394 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 STRNO43815 780 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 HBP1O60381 514 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 LDHAP00338 332 aaKnown RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 F12P00748 615 aaPredicted RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 CALCAP01258 141 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 FTLP02792 175 aaPredicted RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 GTF2H1P32780 548 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 GCLCP48506 637 aaPredicted RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ARHGAP1Q07960 439 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 MXD4Q14582 209 aaPredicted RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 PSMD6Q15008 389 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 BRD3Q15059 726 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 MAPK6Q16659 721 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 SPRYD7Q5W111 196 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 TAPT1Q6NXT6 567 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ANKRD23Q86SG2 305 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 DAAM2Q86T65 1068 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 NOP9Q86U38 636 aaKnown RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 CDR2LQ86X02 465 aaPredicted RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ZBTB8OSQ8IWT0 167 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 FAM71AQ8IYT1 594 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 SPATA4Q8NEY3 305 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 OLIG1Q8TAK6 271 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 SLC35G2Q8TBE7 412 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 AFG1LQ8WV93 481 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 LMBR1Q8WVP7 490 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 SHC3Q92529 594 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ZBTB9Q96C00 473 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ARHGEF26Q96DR7 871 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 PPP1R16BQ96T49 567 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 PTPN18Q99952 460 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 INO80BQ9C086 356 aaPredicted RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 THAP2Q9H0W7 228 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ERAP1Q9NZ08 941 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 CHORDC1Q9UHD1 332 aaPredicted RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 DIS3Q9Y2L1 958 aaKnown RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 STYXL1Q9Y6J8 313 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 A0A0G2JMZ2 1700 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ANKRD62A6NC57 917 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 UNCXA6NJT0 531 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 KIAA0391O15091 583 aaKnown RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 MSCO60682 206 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 PHACTR2O75167 634 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 CSDE1O75534 798 aaKnown RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ZRANB2O95218 330 aaKnown RBP eCLIP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 GH1P01241 217 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 PIGRP01833 764 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 HLA-DRAP01903 254 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 C4BPAP04003 597 aaKnown RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 PRKCBP05771 671 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 MMEP08473 750 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 INSRRP14616 1297 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 TNFSF9P41273 254 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 PIK3CAP42336 1068 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 SLC26A2P50443 739 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 EFNA5P52803 228 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 FKBP1BP68106 108 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 LAMC2Q13753 1193 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 LONRF2Q1L5Z9 754 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 ZACNQ401N2 412 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 CFAP221Q4G0U5 840 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 WDR44Q5JSH3 913 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 TDRD10Q5VZ19 366 aaKnown RBP4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 SPOPLQ6IQ16 392 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 PEX26Q7Z412 305 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 GPR142Q7Z601 462 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 EPS8L1Q8TE68 723 aa4.28□□□□□ -1.72
LRRTM4-201ENST00000409088 PCDHB18PQ96TA0 734 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms