RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 RHPN2Q8IUC4 686 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 PLEKHO2Q8TD55 490 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 RMDN3Q96TC7 470 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 TTC1Q99614 292 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 PAGR1Q9BTK6 254 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 COA1Q9GZY4 146 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 NAALADL1Q9UQQ1 740 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.85□□□□□ -0.99
SNX13-201ENST00000409076 HEY1Q9Y5J3 304 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 NFS1Q9Y697 457 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 CYP3A7-CYP3A51PA0A087WV96 503 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.85□□□□□ -0.99
SNX13-201ENST00000409076 CETPP11597 493 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 CHRNA3P32297 505 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 CETN2P41208 172 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 ERMARDQ5T6L9 678 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 CC2D2BQ6DHV5 1058 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 C1orf228Q6PIY5 440 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 DLK2Q6UY11 383 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 NLRX1Q86UT6 975 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 HES6Q96HZ4 224 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 KREMEN1Q96MU8 473 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 NUDCD1Q96RS6 583 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 SMC6Q96SB8 1091 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 DDX50Q9BQ39 737 aaKnown RBP8.85□□□□□ -0.99
SNX13-201ENST00000409076 CYP4F11Q9HBI6 524 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.85□□□□□ -0.99
SNX13-201ENST00000409076 NR2E3Q9Y5X4 410 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 LCA5LO95447 670 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 NQO1P15559 274 aaKnown RBP8.85□□□□□ -0.99
SNX13-201ENST00000409076 GAP43P17677 238 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 CNGA1P29973 690 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 RAP1GAPP47736 663 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 RPL7AP62424 266 aaKnown RBP8.85□□□□□ -0.99
SNX13-201ENST00000409076 MPP2Q14168 576 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 CNGA2Q16280 664 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 ZBTB41Q5SVQ8 909 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 DUPD1Q68J44 220 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 RHOT2Q8IXI1 618 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 AKT1S1Q96B36 256 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 EDEM3Q9BZQ6 932 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 STMN4Q9H169 189 aaPredicted RBP8.85□□□□□ -0.99
SNX13-201ENST00000409076 CNOT10Q9H9A5 744 aaKnown RBP8.85□□□□□ -0.99
SNX13-201ENST00000409076 TRAF3IP3Q9Y228 551 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 ARHGAP42A6NI28 874 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 UBTFL6P0CB48 400 aaPredicted RBP8.84□□□□□ -0.99
SNX13-201ENST00000409076 CHRNB2P17787 502 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 POLGP54098 1239 aaPredicted RBP8.84□□□□□ -0.99
SNX13-201ENST00000409076 TAS2R40P59535 323 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 AGBL2Q5U5Z8 902 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 LRIG3Q6UXM1 1119 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 C1orf186Q6ZWK4 172 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 FITM2Q8N6M3 262 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 CFAP61Q8NHU2 1237 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 EPS8L1Q8TE68 723 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 CCDC17Q96LX7 622 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 TRABDQ9H4I3 376 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 RAB20Q9NX57 234 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 UMODL1Q5DID0 1318 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 RFX6Q8HWS3 928 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 SUGP1Q8IWZ8 645 aaKnown RBP8.84□□□□□ -0.99
SNX13-201ENST00000409076 C1orf131Q8NDD1 294 aaKnown RBP8.84□□□□□ -0.99
SNX13-201ENST00000409076 RSAD2Q8WXG1 361 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 IFT74Q96LB3 600 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 FAM20AQ96MK3 541 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 TARS2Q9BW92 718 aaKnown RBP8.84□□□□□ -0.99
SNX13-201ENST00000409076 CEP41Q9BYV8 373 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 TRIM6Q9C030 488 aaPredicted RBP8.84□□□□□ -0.99
SNX13-201ENST00000409076 MYLK2Q9H1R3 596 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 CARD9Q9H257 536 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 EHMT1Q9H9B1 1298 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 GPATCH2LQ9NWQ4 482 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 GTF3C4Q9UKN8 822 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 DNPEPQ9ULA0 475 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 H0YIN7 160 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 SMIM24O75264 130 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 RTN2O75298 545 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 FOSP01100 380 aaPredicted RBP8.84□□□□□ -0.99
SNX13-201ENST00000409076 ZCCHC18P0CG32 403 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 ITGB5P18084 799 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 VCAM1P19320 739 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 GNA15P30679 374 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 SLC8A1P32418 973 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 HSPA1LP34931 641 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 SOX11P35716 441 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 EPHB1P54762 984 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 SPP2Q13103 211 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 AP3B2Q13367 1082 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 BMPR2Q13873 1038 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 PPP6R3Q5H9R7 873 aaPredicted RBP8.84□□□□□ -0.99
SNX13-201ENST00000409076 LVRNQ6Q4G3 990 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 SV2AQ7L0J3 742 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 SYN2Q92777 582 aaPredicted RBP8.84□□□□□ -0.99
SNX13-201ENST00000409076 LENG9Q96B70 501 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 UNKQ9C0B0 810 aaKnown RBP8.84□□□□□ -0.99
SNX13-201ENST00000409076 NINJ2Q9NZG7 142 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 GRHL1Q9NZI5 618 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 NOP53Q9NZM5 478 aaKnown RBP8.84□□□□□ -0.99
SNX13-201ENST00000409076 SEPT10Q9P0V9 454 aa8.84□□□□□ -0.99
SNX13-201ENST00000409076 ZMYND8Q9ULU4 1186 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms