RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 ELMO3Q96BJ8 720 aa16.32■□□□□ 0.2
LIMK2-204ENST00000406516 KREMEN1Q96MU8 473 aa16.32■□□□□ 0.2
LIMK2-204ENST00000406516 PABPC3Q9H361 631 aaKnown RBP16.32■□□□□ 0.2
LIMK2-204ENST00000406516 MROH8Q9H579 483 aa16.32■□□□□ 0.2
LIMK2-204ENST00000406516 AGO4Q9HCK5 861 aaKnown RBP16.32■□□□□ 0.2
LIMK2-204ENST00000406516 GRHL1Q9NZI5 618 aa16.32■□□□□ 0.2
LIMK2-204ENST00000406516 NOCTQ9UK39 431 aaKnown RBP16.32■□□□□ 0.2
LIMK2-204ENST00000406516 TCRBV7S2A1N4TA0A589 114 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 FKTNO75072 461 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 MMEP08473 750 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 PYGMP11217 842 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 YWHABP31946 246 aaKnown RBP16.31■□□□□ 0.2
LIMK2-204ENST00000406516 LLGL1Q15334 1064 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 UBAP2Q5T6F2 1119 aaKnown RBP16.31■□□□□ 0.2
LIMK2-204ENST00000406516 CCDC137Q6PK04 289 aaKnown RBP16.31■□□□□ 0.2
LIMK2-204ENST00000406516 YTHDF3Q7Z739 585 aaKnown RBP16.31■□□□□ 0.2
LIMK2-204ENST00000406516 HOOK3Q86VS8 718 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 CBWD2Q8IUF1 395 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 UHMK1Q8TAS1 419 aaKnown RBP16.31■□□□□ 0.2
LIMK2-204ENST00000406516 RNF25Q96BH1 459 aaPredicted RBP16.31■□□□□ 0.2
LIMK2-204ENST00000406516 SAAL1Q96ER3 474 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 ACAD9Q9H845 621 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 DBR1Q9UK59 544 aaKnown RBP16.31■□□□□ 0.2
LIMK2-204ENST00000406516 TRPC6Q9Y210 931 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 PTPN22Q9Y2R2 807 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 SPOPO43791 374 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 FSBPO95073 299 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 MAPTP10636 758 aaKnown RBP16.31■□□□□ 0.2
LIMK2-204ENST00000406516 HSPA8P11142 646 aaKnown RBP16.31■□□□□ 0.2
LIMK2-204ENST00000406516 MAPK4P31152 587 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 FNTAP49354 379 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 PEX5P50542 639 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 MTMR1Q13613 665 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 FAM102BQ5T8I3 360 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 PLA2G4FQ68DD2 849 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 NSMFQ6X4W1 530 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 C12orf56Q8IXR9 622 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 FAM71AQ8IYT1 594 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 CHST13Q8NET6 341 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 SEMA4DQ92854 862 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 TLCD1Q96CP7 247 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 KIFC3Q9BVG8 833 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 NUP85Q9BW27 656 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.31■□□□□ 0.21e-7■■□□□ 12.9
LIMK2-204ENST00000406516 LOXHD1Q8IVV2 1947 aa16.31■□□□□ 0.2
LIMK2-204ENST00000406516 EIF2AK2P19525 551 aaKnown RBP16.3■□□□□ 0.2
LIMK2-204ENST00000406516 CTNNA2P26232 953 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 HNRNPH1P31943 449 aaKnown RBP16.3■□□□□ 0.2
LIMK2-204ENST00000406516 MRPS9P82933 396 aaKnown RBP16.3■□□□□ 0.2
LIMK2-204ENST00000406516 GTF2BQ00403 316 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 KCNV1Q6PIU1 500 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 ZNF564Q8TBZ8 553 aaPredicted RBP16.3■□□□□ 0.2
LIMK2-204ENST00000406516 VTI1AQ96AJ9 217 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 RPS6KC1Q96S38 1066 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 POP1Q99575 1024 aaKnown RBP16.3■□□□□ 0.2
LIMK2-204ENST00000406516 A1CFQ9NQ94 594 aaKnown RBP16.3■□□□□ 0.2
LIMK2-204ENST00000406516 RPTORQ8N122 1335 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 CENPFP49454 3210 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 TNPO2O14787 897 aaKnown RBP16.3■□□□□ 0.2
LIMK2-204ENST00000406516 PAEPP09466 180 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 NUDT17P0C025 328 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 LBX1P52954 281 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 SLC29A2Q14542 456 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 SNRNP35Q16560 246 aaKnown RBP16.3■□□□□ 0.2
LIMK2-204ENST00000406516 SPDYCQ5MJ68 293 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 C6orf89Q6UWU4 347 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 PLEKHH3Q7Z736 793 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 CNPY4Q8N129 248 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 ANKRD35Q8N283 1001 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 ZNF653Q96CK0 615 aa16.3■□□□□ 0.2
LIMK2-204ENST00000406516 CCDC169A6NNP5 214 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 PGK2P07205 417 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 FGFR4P22455 802 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 DRG2P55039 364 aaKnown RBP16.29■□□□□ 0.2
LIMK2-204ENST00000406516 FMO1Q01740 532 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 MKRN4PQ13434 485 aaPredicted RBP16.29■□□□□ 0.2
LIMK2-204ENST00000406516 CCDC105Q8IYK2 499 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 SELENOSQ9BQE4 189 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 SEMA4AQ9H3S1 761 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 PCYOX1Q9UHG3 505 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 ANKRD63C9JTQ0 380 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 KCNJ1P48048 391 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 FCGRTP55899 365 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 BAATQ14032 418 aaPredicted RBP16.29■□□□□ 0.2
LIMK2-204ENST00000406516 TCEAL1Q15170 157 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 CCDC121Q6ZUS5 278 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 SEC16BQ96JE7 1060 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 CABS1Q96KC9 395 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 MMP19Q99542 508 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 WNT8AQ9H1J5 351 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 AZI2Q9H6S1 392 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 TOPORSQ9NS56 1045 aaPredicted RBP16.29■□□□□ 0.2
LIMK2-204ENST00000406516 FBXO40Q9UH90 709 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 GGA2Q9UJY4 613 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 UBIAD1Q9Y5Z9 338 aa16.29■□□□□ 0.2
LIMK2-204ENST00000406516 MYCLP12524 364 aaPredicted RBP16.28■□□□□ 0.2
LIMK2-204ENST00000406516 GZMAP12544 262 aa16.28■□□□□ 0.2
LIMK2-204ENST00000406516 ADSSP30520 456 aa16.28■□□□□ 0.2
LIMK2-204ENST00000406516 CDR1P51861 262 aa16.28■□□□□ 0.2
LIMK2-204ENST00000406516 MFAP3P55082 362 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms