RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 PCDHGA2Q9Y5H1 932 aa23.21■■□□□ 1.31
RHBDD3-202ENST00000406335 MYH11P35749 1972 aa23.21■■□□□ 1.31
RHBDD3-202ENST00000406335 B3GAT3O94766 335 aa23.2■■□□□ 1.3
RHBDD3-202ENST00000406335 OR52Z1P0C646 297 aa23.2■■□□□ 1.3
RHBDD3-202ENST00000406335 GJB2P29033 226 aa23.2■■□□□ 1.3
RHBDD3-202ENST00000406335 TOB1P50616 345 aaPredicted RBP23.2■■□□□ 1.3
RHBDD3-202ENST00000406335 RAB33AQ14088 237 aa23.2■■□□□ 1.3
RHBDD3-202ENST00000406335 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.2■■□□□ 1.3
RHBDD3-202ENST00000406335 DDX23Q9BUQ8 820 aaKnown RBP23.2■■□□□ 1.3
RHBDD3-202ENST00000406335 PDZD7Q9H5P4 517 aa23.2■■□□□ 1.3
RHBDD3-202ENST00000406335 ZSCAN32Q9NX65 697 aa23.2■■□□□ 1.3
RHBDD3-202ENST00000406335 KCNH3Q9ULD8 1083 aa23.2■■□□□ 1.3
RHBDD3-202ENST00000406335 CDY1Q9Y6F8 540 aa23.2■■□□□ 1.3
RHBDD3-202ENST00000406335 PTGESO14684 152 aa23.19■■□□□ 1.3
RHBDD3-202ENST00000406335 TRAPPC3O43617 180 aa23.19■■□□□ 1.3
RHBDD3-202ENST00000406335 PRKCBP05771 671 aa23.19■■□□□ 1.3
RHBDD3-202ENST00000406335 SPATA31C1P0DKV0 1188 aa23.19■■□□□ 1.3
RHBDD3-202ENST00000406335 ELF1P32519 619 aa23.19■■□□□ 1.3
RHBDD3-202ENST00000406335 MCM2P49736 904 aa23.19■■□□□ 1.3
RHBDD3-202ENST00000406335 ORC2Q13416 577 aaPredicted RBP23.19■■□□□ 1.3
RHBDD3-202ENST00000406335 ZNF852Q6ZMS4 543 aa23.19■■□□□ 1.3
RHBDD3-202ENST00000406335 NPAS3Q8IXF0 933 aa23.19■■□□□ 1.3
RHBDD3-202ENST00000406335 C4orf32Q8N8J7 132 aa23.19■■□□□ 1.3
RHBDD3-202ENST00000406335 BACH2Q9BYV9 841 aa23.19■■□□□ 1.3
RHBDD3-202ENST00000406335 FZD8Q9H461 694 aa23.19■■□□□ 1.3
RHBDD3-202ENST00000406335 NOL7Q9UMY1 257 aaKnown RBP23.19■■□□□ 1.3
RHBDD3-202ENST00000406335 MED24O75448 989 aa23.18■■□□□ 1.3
RHBDD3-202ENST00000406335 LRG1P02750 347 aa23.18■■□□□ 1.3
RHBDD3-202ENST00000406335 TRAPPC10P48553 1259 aa23.18■■□□□ 1.3
RHBDD3-202ENST00000406335 TSSK4Q6SA08 328 aa23.18■■□□□ 1.3
RHBDD3-202ENST00000406335 USP18Q9UMW8 372 aa23.18■■□□□ 1.3
RHBDD3-202ENST00000406335 USP20Q9Y2K6 914 aa23.18■■□□□ 1.3
RHBDD3-202ENST00000406335 KIF3AQ9Y496 699 aa23.18■■□□□ 1.3
RHBDD3-202ENST00000406335 PCDHB6Q9Y5E3 794 aa23.18■■□□□ 1.3
RHBDD3-202ENST00000406335 ARPP19P56211 112 aa23.17■■□□□ 1.3
RHBDD3-202ENST00000406335 FAM187BQ17R55 369 aa23.17■■□□□ 1.3
RHBDD3-202ENST00000406335 GLRA4Q5JXX5 417 aa23.17■■□□□ 1.3
RHBDD3-202ENST00000406335 MCTP1Q6DN14 999 aa23.17■■□□□ 1.3
RHBDD3-202ENST00000406335 CATSPER3Q86XQ3 398 aa23.17■■□□□ 1.3
RHBDD3-202ENST00000406335 NACC1Q96RE7 527 aa23.17■■□□□ 1.3
RHBDD3-202ENST00000406335 HEBP1Q9NRV9 189 aa23.17■■□□□ 1.3
RHBDD3-202ENST00000406335 TDRD15B5MCY1 1934 aaKnown RBP23.17■■□□□ 1.3
RHBDD3-202ENST00000406335 ARHGEF35A5YM69 484 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 TTLL13PA6NNM8 815 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 PRRG1O14668 218 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 ECI2O75521 394 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 RHOP08100 348 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 PTPN2P17706 415 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 TARSP26639 723 aaKnown RBP23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 CLCNKBP51801 687 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 CDCA2Q69YH5 1023 aaPredicted RBP23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 ANKS3Q6ZW76 656 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 RTL10Q7L3V2 364 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 APBB1IPQ7Z5R6 666 aaPredicted RBP23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 CXCL16Q9H2A7 254 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 GDE1Q9NZC3 331 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 MTRRQ9UBK8 725 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 GMEB2Q9UKD1 530 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 CDV3Q9UKY7 258 aaKnown RBP23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 RAB23Q9ULC3 237 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 SMG5Q9UPR3 1016 aaKnown RBP23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 SMC3Q9UQE7 1217 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 DCHS1Q96JQ0 3298 aa23.16■■□□□ 1.3
RHBDD3-202ENST00000406335 TRIP11Q15643 1979 aa23.15■■□□□ 1.3
RHBDD3-202ENST00000406335 ACKR2O00590 384 aa23.15■■□□□ 1.3
RHBDD3-202ENST00000406335 POU2F2P09086 479 aa23.15■■□□□ 1.3
RHBDD3-202ENST00000406335 FGFR3P22607 806 aa23.15■■□□□ 1.3
RHBDD3-202ENST00000406335 PTGDRQ13258 359 aa23.15■■□□□ 1.3
RHBDD3-202ENST00000406335 DCAF4L1Q3SXM0 396 aa23.15■■□□□ 1.3
RHBDD3-202ENST00000406335 PADI6Q6TGC4 694 aa23.15■■□□□ 1.3
RHBDD3-202ENST00000406335 IFT74Q96LB3 600 aa23.15■■□□□ 1.3
RHBDD3-202ENST00000406335 TUFT1Q9NNX1 390 aa23.15■■□□□ 1.3
RHBDD3-202ENST00000406335 NDRG2Q9UN36 371 aaKnown RBP23.15■■□□□ 1.3
RHBDD3-202ENST00000406335 PRR5-ARHGAP8B1AHC4 643 aa23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 I3L4J1 428 aa23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 TKTP29401 623 aaKnown RBP23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 ATXN1P54253 815 aaKnown RBP23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 YARSP54577 528 aaKnown RBP23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 ARHGAP8P85298 464 aa23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 LMNB2Q03252 620 aa23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 ADCY1Q08828 1119 aa23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 PPP2R5DQ14738 602 aa23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 PPP2R5AQ15172 486 aa23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 ERMNQ8TAM6 284 aa23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 UROC1Q96N76 676 aa23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 CORO1BQ9BR76 489 aa23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 POLR3CQ9BUI4 534 aaPredicted RBP23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 PLA2G2FQ9BZM2 168 aa23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 BRD9Q9H8M2 597 aa23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 BACE2Q9Y5Z0 518 aa23.14■■□□□ 1.29
RHBDD3-202ENST00000406335 GVINP1Q7Z2Y8 2422 aa23.13■■□□□ 1.29
RHBDD3-202ENST00000406335 TBC1D4O60343 1298 aa23.13■■□□□ 1.29
RHBDD3-202ENST00000406335 NAMPTP43490 491 aa23.13■■□□□ 1.29
RHBDD3-202ENST00000406335 NAB2Q15742 525 aa23.13■■□□□ 1.29
RHBDD3-202ENST00000406335 EEF1DP3Q658K8 133 aa23.13■■□□□ 1.29
RHBDD3-202ENST00000406335 TANGO2Q6ICL3 276 aa23.13■■□□□ 1.29
RHBDD3-202ENST00000406335 ZBTB44Q8NCP5 570 aa23.13■■□□□ 1.29
RHBDD3-202ENST00000406335 CNTNAP3BQ96NU0 1288 aa23.13■■□□□ 1.29
RHBDD3-202ENST00000406335 CNTNAP3Q9BZ76 1288 aa23.13■■□□□ 1.29
RHBDD3-202ENST00000406335 CYP4F11Q9HBI6 524 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms