RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ANKFY1Q9P2R3 1169 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 PCDHB2Q9Y5E7 798 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 CEP250Q9BV73 2442 aa11.52□□□□□ -0.57
RPAIN-204ENST00000405578 C9IYK1 514 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 ZNF623O75123 536 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 PPP1R37O75864 691 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 PRPF6O94906 941 aaKnown RBP11.51□□□□□ -0.57
RPAIN-204ENST00000405578 PIGRP01833 764 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 MCF2P10911 925 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 STK4Q13043 487 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 CCDC183Q5T5S1 534 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 ZNF658Q5TYW1 1059 aaPredicted RBP11.51□□□□□ -0.57
RPAIN-204ENST00000405578 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
RPAIN-204ENST00000405578 TAS1R3Q7RTX0 852 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 DGLUCYQ7Z3D6 616 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 UBALD2Q8IYN6 164 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 ABI1Q8IZP0 508 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 RNF169Q8NCN4 708 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 SPATA20Q8TB22 786 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 ZNF507Q8TCN5 953 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 MICAL1Q8TDZ2 1067 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 STRA6Q9BX79 667 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 GBP3Q9H0R5 595 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 PDZD7Q9H5P4 517 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 SORCS3Q9UPU3 1222 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 DENND4AQ7Z401 1863 aa11.51□□□□□ -0.57
RPAIN-204ENST00000405578 MGEA5O60502 916 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 NPTXRO95502 500 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 ITGA4P13612 1032 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 GATMP50440 423 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 CASP5P51878 434 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 YARSP54577 528 aaKnown RBP11.5□□□□□ -0.57
RPAIN-204ENST00000405578 FAM189BP81408 668 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 NOLC1Q14978 699 aaKnown RBP eCLIP11.5□□□□□ -0.57
RPAIN-204ENST00000405578 KNOP1Q1ED39 458 aaKnown RBP11.5□□□□□ -0.57
RPAIN-204ENST00000405578 BMT2Q1RMZ1 405 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 KLHL40Q2TBA0 621 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 GLB1LQ6UWU2 654 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 EPM2AIP1Q7L775 607 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-204ENST00000405578 RTN4RL1Q86UN2 441 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-204ENST00000405578 ECHDC2Q86YB7 292 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 GUF1Q8N442 669 aaKnown RBP11.5□□□□□ -0.57
RPAIN-204ENST00000405578 SCFD1Q8WVM8 642 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 POMGNT1Q8WZA1 660 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 ERCC4Q92889 916 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-204ENST00000405578 MSTO1Q9BUK6 570 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 CCDC94Q9BW85 323 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-204ENST00000405578 MFSD1Q9H3U5 465 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 TOPORSQ9NS56 1045 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-204ENST00000405578 CDH22Q9UJ99 828 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 CACNA1GO43497 2377 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 FANCMQ8IYD8 2048 aa11.5□□□□□ -0.57
RPAIN-204ENST00000405578 FSD2A1L4K1 749 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 PSMA7O14818 248 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 KIAA0391O15091 583 aaKnown RBP11.49□□□□□ -0.57
RPAIN-204ENST00000405578 CALUO43852 315 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-204ENST00000405578 LETM1O95202 739 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-204ENST00000405578 LDHAP00338 332 aaKnown RBP11.49□□□□□ -0.57
RPAIN-204ENST00000405578 SRGAP2BP0DMP2 458 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 HARSP12081 509 aaKnown RBP11.49□□□□□ -0.57
RPAIN-204ENST00000405578 GARTP22102 1010 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 PROZP22891 400 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 MCL1Q07820 350 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 UBXN11Q5T124 520 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 ANKRD54Q6NXT1 300 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 ARMCX5Q6P1M9 558 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 SYCE2Q6PIF2 218 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 SASS6Q6UVJ0 657 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 MRPL10Q7Z7H8 261 aaKnown RBP11.49□□□□□ -0.57
RPAIN-204ENST00000405578 CDR2LQ86X02 465 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-204ENST00000405578 NELFCDQ8IXH7 590 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 KIAA0895Q8NCT3 520 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 URGCPQ8TCY9 931 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 CDCA3Q99618 268 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-204ENST00000405578 TSG101Q99816 390 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 EIF2AQ9BY44 585 aaKnown RBP11.49□□□□□ -0.57
RPAIN-204ENST00000405578 S1PR5Q9H228 398 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 PTPRHQ9HD43 1115 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 DACH1Q9UI36 760 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 MAN1B1Q9UKM7 699 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 USP20Q9Y2K6 914 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 GIT1Q9Y2X7 761 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 NR2E1Q9Y466 385 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 IPPQ9Y573 584 aa11.49□□□□□ -0.57
RPAIN-204ENST00000405578 ACACBO00763 2458 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 A0A0B4J269 797 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 TTLL13PA6NNM8 815 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 C2CD4DB7Z1M9 353 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 BIN1O00499 593 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 PDXKO00764 312 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 OGTO15294 1046 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 CLTAP09496 248 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 RPL13P26373 211 aaKnown RBP11.48□□□□□ -0.57
RPAIN-204ENST00000405578 UBE3AQ05086 875 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 KCNA1Q09470 495 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 COBLL1Q53SF7 1204 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 SPOUT1Q5T280 376 aaKnown RBP11.48□□□□□ -0.57
RPAIN-204ENST00000405578 EEF1DP3Q658K8 133 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 CWF19L1Q69YN2 538 aaKnown RBP11.48□□□□□ -0.57
RPAIN-204ENST00000405578 ISM2Q6H9L7 571 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms