RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 PI4K2AQ9BTU6 479 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 EPC1Q9H2F5 836 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 RASSF4Q9H2L5 321 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 PRMT7Q9NVM4 692 aaPredicted RBP12.72□□□□□ -0.37
SMS-202ENST00000404933 NOCTQ9UK39 431 aaKnown RBP12.72□□□□□ -0.37
SMS-202ENST00000404933 PTPRJQ12913 1337 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 ABLIM1O14639 778 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 PHACTR2O75167 634 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 VNN1O95497 513 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 GJB1P08034 283 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 GZMAP12544 262 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 PAFAH1B1P43034 410 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 PDE6CP51160 858 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 TNFAIP2Q03169 654 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 FAM187BQ17R55 369 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 TMEM132AQ24JP5 1023 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 MAP9Q49MG5 647 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 HSP90B2PQ58FF3 399 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 MTHFD1LQ6UB35 978 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 NOP9Q86U38 636 aaKnown RBP12.72□□□□□ -0.37
SMS-202ENST00000404933 DNAAF5Q86Y56 855 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 IFNLR1Q8IU57 520 aaPredicted RBP12.72□□□□□ -0.37
SMS-202ENST00000404933 LRRC57Q8N9N7 239 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 NOA1Q8NC60 698 aaKnown RBP12.72□□□□□ -0.37
SMS-202ENST00000404933 TAF4BQ92750 862 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 ISCUQ9H1K1 167 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 PTPRHQ9HD43 1115 aa12.72□□□□□ -0.37
SMS-202ENST00000404933 DOCK3Q8IZD9 2030 aa12.71□□□□□ -0.37
SMS-202ENST00000404933 PDE2AO00408 941 aaPredicted RBP12.71□□□□□ -0.38
SMS-202ENST00000404933 CES2O00748 559 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 RTN2O75298 545 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 HOXC6P09630 235 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 KRT5P13647 590 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 CYP11B1P15538 503 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 CHRNB2P17787 502 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 TNFSF9P41273 254 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 BPIFB4P59827 614 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 CDR2Q01850 454 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 PPFIA1Q13136 1202 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 RPS6KA1Q15418 735 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 ZNF568Q3ZCX4 644 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 CFAP221Q4G0U5 840 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 SEZ6Q53EL9 994 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 SLFN11Q7Z7L1 901 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 SAPCD2Q86UD0 394 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 SLC47A2Q86VL8 602 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 PALB2Q86YC2 1186 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 RHOT2Q8IXI1 618 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 DHX38Q92620 1227 aaKnown RBP12.71□□□□□ -0.38
SMS-202ENST00000404933 ZBTB10Q96DT7 871 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 TAS2R14Q9NYV8 317 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 CPSF3Q9UKF6 684 aaKnown RBP12.71□□□□□ -0.38
SMS-202ENST00000404933 AKT3Q9Y243 479 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 TNFSF13BQ9Y275 285 aa12.71□□□□□ -0.38
SMS-202ENST00000404933 TARSL2A2RTX5 802 aaKnown RBP12.7□□□□□ -0.38
SMS-202ENST00000404933 ZEB2O60315 1214 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 FTLP02792 175 aaPredicted RBP12.7□□□□□ -0.38
SMS-202ENST00000404933 SLC10A3P09131 477 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 RHOXF2BP0C7M4 288 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 ABCB4P21439 1286 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 TBXAS1P24557 533 aaPredicted RBP12.7□□□□□ -0.38
SMS-202ENST00000404933 CXCR5P32302 372 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 AARSP49588 968 aaKnown RBP eCLIP12.7□□□□□ -0.388e-6■■■■■ 52.4
SMS-202ENST00000404933 NCOA4Q13772 614 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 GRIK4Q16099 956 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 C17orf99Q6UX52 265 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 IFNL1Q8IU54 200 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 OR5B17Q8NGF7 314 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 SLC35G2Q8TBE7 412 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 RUBCNQ92622 972 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 ZNF668Q96K58 619 aaPredicted RBP12.7□□□□□ -0.38
SMS-202ENST00000404933 FAM84AQ96KN4 292 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 PSMB7Q99436 277 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 RHOXF2Q9BQY4 288 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 IMPG2Q9BZV3 1241 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 THAP2Q9H0W7 228 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 IFT122Q9HBG6 1241 aa12.7□□□□□ -0.38
SMS-202ENST00000404933 A0A087WZ62 844 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 RRN3P2A6NIE6 340 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 KIF4AO95239 1232 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 GPC5P78333 572 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 FMO1Q01740 532 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 CUL2Q13617 745 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 TCEAL1Q15170 157 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 DUOXA2Q1HG44 320 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 CCDC70Q6NSX1 233 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 PEX26Q7Z412 305 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 DAAM2Q86T65 1068 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 ZNF677Q86XU0 584 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 GOLGA6L1Q8N7Z2 621 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 FDXACB1Q9BRP7 624 aaPredicted RBP12.69□□□□□ -0.38
SMS-202ENST00000404933 MINDY3Q9H8M7 445 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 ZFYVE28Q9HCC9 887 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 ANK1P16157 1881 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 DCAF8L1A6NGE4 600 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 A6NJR5 290 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 H3BQF6 201 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 DYNC1LI2O43237 492 aaPredicted RBP12.69□□□□□ -0.38
SMS-202ENST00000404933 B4GALT5O43286 388 aa12.69□□□□□ -0.38
SMS-202ENST00000404933 IL18RAPO95256 599 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms