RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 C15orf39Q6ZRI6 1047 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 ALYREFQ86V81 257 aaKnown RBP14.55□□□□□ -0.08
SDF4-203ENST00000403997 HSCBQ8IWL3 235 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 KRI1Q8N9T8 703 aaKnown RBP14.55□□□□□ -0.08
SDF4-203ENST00000403997 TDRD5Q8NAT2 981 aaKnown RBP14.55□□□□□ -0.08
SDF4-203ENST00000403997 CMASQ8NFW8 434 aaPredicted RBP14.55□□□□□ -0.08
SDF4-203ENST00000403997 LNX1Q8TBB1 728 aaPredicted RBP14.55□□□□□ -0.08
SDF4-203ENST00000403997 HDAC7Q8WUI4 952 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 PIK3R5Q8WYR1 880 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 ZMAT2Q96NC0 199 aaKnown RBP14.55□□□□□ -0.08
SDF4-203ENST00000403997 USP28Q96RU2 1077 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 PLEKHA4Q9H4M7 779 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 TBX20Q9UMR3 447 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 PIEZO1Q92508 2521 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 TRIP11Q15643 1979 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 TMEM221A6NGB7 291 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 M0R296 226 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 TRAPPC3O43617 180 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 RFPL2O75678 378 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 C1RP00736 705 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 SCP2P22307 547 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 ZNF131P52739 623 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 SLC39A14Q15043 492 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 SLC10A6Q3KNW5 377 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 PDXDC1Q6P996 788 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 LILRA6Q6PI73 481 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 CD300LGQ6UXG3 332 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 CYP26C1Q6V0L0 522 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.54□□□□□ -0.08
SDF4-203ENST00000403997 TRIM67Q6ZTA4 783 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 CCDC149Q6ZUS6 474 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 HFE2Q6ZVN8 426 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 DYMQ7RTS9 669 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 PLCD3Q8N3E9 789 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 KREMEN2Q8NCW0 462 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 SMG7Q92540 1137 aaKnown RBP14.54□□□□□ -0.08
SDF4-203ENST00000403997 ACSF2Q96CM8 615 aaPredicted RBP14.54□□□□□ -0.08
SDF4-203ENST00000403997 CLSTN3Q9BQT9 956 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 PIDD1Q9HB75 910 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 CNTN3Q9P232 1028 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 STK17AQ9UEE5 414 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 LIMD1Q9UGP4 676 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 USTQ9Y2C2 406 aa14.54□□□□□ -0.08
SDF4-203ENST00000403997 MYO10Q9HD67 2058 aa14.53□□□□□ -0.08
SDF4-203ENST00000403997 I3L4J1 428 aa14.53□□□□□ -0.08
SDF4-203ENST00000403997 PODXLO00592 558 aa14.53□□□□□ -0.08
SDF4-203ENST00000403997 HNRNPDLO14979 420 aaKnown RBP14.53□□□□□ -0.08
SDF4-203ENST00000403997 CLTAP09496 248 aa14.53□□□□□ -0.08
SDF4-203ENST00000403997 FGFR3P22607 806 aa14.53□□□□□ -0.08
SDF4-203ENST00000403997 NMT1P30419 496 aaKnown RBP14.53□□□□□ -0.08
SDF4-203ENST00000403997 BRCC3P46736 316 aa14.53□□□□□ -0.08
SDF4-203ENST00000403997 FOXD4L5Q5VV16 416 aaPredicted RBP14.53□□□□□ -0.08
SDF4-203ENST00000403997 OTOP3Q7RTS5 596 aa14.53□□□□□ -0.08
SDF4-203ENST00000403997 ZDHHC14Q8IZN3 488 aa14.53□□□□□ -0.08
SDF4-203ENST00000403997 C3orf58Q8NDZ4 430 aa14.53□□□□□ -0.08
SDF4-203ENST00000403997 FOXD4L4Q8WXT5 416 aaPredicted RBP14.53□□□□□ -0.08
SDF4-203ENST00000403997 KCNN1Q92952 543 aa14.53□□□□□ -0.08
SDF4-203ENST00000403997 C18orf25Q96B23 403 aaPredicted RBP14.53□□□□□ -0.08
SDF4-203ENST00000403997 PANK2Q9BZ23 570 aa14.53□□□□□ -0.08
SDF4-203ENST00000403997 HAPLN2Q9GZV7 340 aa14.53□□□□□ -0.08
SDF4-203ENST00000403997 TFIP11Q9UBB9 837 aaKnown RBP14.53□□□□□ -0.08
SDF4-203ENST00000403997 TECTAO75443 2155 aa14.53□□□□□ -0.08
SDF4-203ENST00000403997 MEFVO15553 781 aaPredicted RBP14.52□□□□□ -0.09
SDF4-203ENST00000403997 ADAM12O43184 909 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 ASGR2P07307 311 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 CXCL8P10145 99 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 TKTP29401 623 aaKnown RBP14.52□□□□□ -0.09
SDF4-203ENST00000403997 RPL9P32969 192 aaKnown RBP14.52□□□□□ -0.09
SDF4-203ENST00000403997 ABCD1P33897 745 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 OR1D2P34982 312 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 SIGLEC14Q08ET2 396 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 STK38Q15208 465 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 KYAT1Q16773 422 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 CCDC73Q6ZRK6 1079 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 ANKS3Q6ZW76 656 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 SV2BQ7L1I2 683 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 DDX12PQ92771 950 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 PBXIP1Q96AQ6 731 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 MFSD14AQ96MC6 490 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 ZNF396Q96N95 335 aaPredicted RBP14.52□□□□□ -0.09
SDF4-203ENST00000403997 FIZ1Q96SL8 496 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 PLEKHA5Q9HAU0 1116 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 WDR6Q9NNW5 1121 aaKnown RBP14.52□□□□□ -0.09
SDF4-203ENST00000403997 ZDHHC7Q9NXF8 308 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 NUB1Q9Y5A7 615 aa14.52□□□□□ -0.09
SDF4-203ENST00000403997 MORC2Q9Y6X9 1032 aaPredicted RBP14.52□□□□□ -0.09
SDF4-203ENST00000403997 PLXNA3P51805 1871 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 OGTO15294 1046 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 ZMYND10O75800 440 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 PIGRP01833 764 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 TNFSF9P41273 254 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 STAT6P42226 847 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 NASPP49321 788 aaPredicted RBP14.51□□□□□ -0.09
SDF4-203ENST00000403997 GTF2BQ00403 316 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 SPAG1Q07617 926 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 RAB33AQ14088 237 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 ZC2HC1CQ53FD0 456 aaPredicted RBP14.51□□□□□ -0.09
SDF4-203ENST00000403997 LIN9Q5TKA1 542 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 BMP8AQ7Z5Y6 402 aa14.51□□□□□ -0.09
SDF4-203ENST00000403997 SFR1Q86XK3 245 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms