RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 KCNJ18B7U540 433 aa36.08■■■■□ 3.37
CSNK1E-204ENST00000403904 INPPL1O15357 1258 aa36.08■■■■□ 3.37
CSNK1E-204ENST00000403904 KCNE1P15382 129 aa36.08■■■■□ 3.37
CSNK1E-204ENST00000403904 KCNJ12Q14500 433 aa36.08■■■■□ 3.37
CSNK1E-204ENST00000403904 PAN2Q504Q3 1202 aaKnown RBP36.08■■■■□ 3.37
CSNK1E-204ENST00000403904 EFCAB13Q8IY85 973 aa36.08■■■■□ 3.37
CSNK1E-204ENST00000403904 URGCPQ8TCY9 931 aa36.08■■■■□ 3.37
CSNK1E-204ENST00000403904 TMC2Q8TDI7 906 aa36.08■■■■□ 3.37
CSNK1E-204ENST00000403904 PTPRJQ12913 1337 aa36.07■■■■□ 3.37
CSNK1E-204ENST00000403904 LAMA3Q16787 3333 aa36.07■■■■□ 3.37
CSNK1E-204ENST00000403904 COL4A6Q14031 1691 aa36.07■■■■□ 3.37
CSNK1E-204ENST00000403904 LRRIQ3A6PVS8 624 aaPredicted RBP36.07■■■■□ 3.37
CSNK1E-204ENST00000403904 TRIM49P0CI25 452 aa36.07■■■■□ 3.37
CSNK1E-204ENST00000403904 TRIM49CP0CI26 452 aa36.07■■■■□ 3.37
CSNK1E-204ENST00000403904 DCAF17Q5H9S7 520 aaPredicted RBP36.07■■■■□ 3.37
CSNK1E-204ENST00000403904 ZNF689Q96CS4 500 aaPredicted RBP36.07■■■■□ 3.37
CSNK1E-204ENST00000403904 THP07101 528 aa36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 ZNF18P17022 549 aa36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 TNNI1P19237 187 aa36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 TMEM132DQ14C87 1099 aa36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 TCP11X2Q5H9J9 407 aa36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 TCERG1LQ5VWI1 586 aa36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 CHRDL2Q6WN34 429 aa36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 TRIM59Q8IWR1 403 aa36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 YME1L1Q96TA2 773 aa36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 RC3H2Q9HBD1 1191 aaKnown RBP36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 GOLGA6L19H0YKK7 550 aa36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 TFAMQ00059 246 aaKnown RBP36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 C1orf220Q5T0J3 134 aa36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 PPP1R10Q96QC0 940 aaKnown RBP36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 CGRRF1Q99675 332 aa36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 TBC1D13Q9NVG8 400 aa36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 C2CD2Q9Y426 696 aa36.06■■■■□ 3.36
CSNK1E-204ENST00000403904 MTIF2P46199 727 aaKnown RBP36.05■■■■□ 3.36
CSNK1E-204ENST00000403904 FAM109BQ6ICB4 259 aaPredicted RBP36.05■■■■□ 3.36
CSNK1E-204ENST00000403904 USP37Q86T82 979 aa36.05■■■■□ 3.36
CSNK1E-204ENST00000403904 WDR49Q8IV35 697 aa36.05■■■■□ 3.36
CSNK1E-204ENST00000403904 C18orf25Q96B23 403 aaPredicted RBP36.05■■■■□ 3.36
CSNK1E-204ENST00000403904 KANSL3Q9P2N6 904 aa36.05■■■■□ 3.36
CSNK1E-204ENST00000403904 GRXCR1A8MXD5 290 aa36.04■■■■□ 3.36
CSNK1E-204ENST00000403904 ATP1A3P13637 1013 aa36.04■■■■□ 3.36
CSNK1E-204ENST00000403904 CDK11BP21127 795 aaKnown RBP36.04■■■■□ 3.36
CSNK1E-204ENST00000403904 EEF1GP26641 437 aaKnown RBP36.04■■■■□ 3.36
CSNK1E-204ENST00000403904 MCCD1P59942 119 aaPredicted RBP36.04■■■■□ 3.36
CSNK1E-204ENST00000403904 CLDN10P78369 228 aa36.04■■■■□ 3.36
CSNK1E-204ENST00000403904 HTRA4P83105 476 aaPredicted RBP36.04■■■■□ 3.36
CSNK1E-204ENST00000403904 GRIK3Q13003 919 aa36.04■■■■□ 3.36
CSNK1E-204ENST00000403904 ZBTB6Q15916 424 aa36.04■■■■□ 3.36
CSNK1E-204ENST00000403904 TMEM130Q8N3G9 435 aa36.04■■■■□ 3.36
CSNK1E-204ENST00000403904 OR5B17Q8NGF7 314 aa36.04■■■■□ 3.36
CSNK1E-204ENST00000403904 ZNF516Q92618 1163 aa36.04■■■■□ 3.36
CSNK1E-204ENST00000403904 RBSNQ9H1K0 784 aa36.04■■■■□ 3.36
CSNK1E-204ENST00000403904 DERAQ9Y315 318 aa36.04■■■■□ 3.36
CSNK1E-204ENST00000403904 RNASELQ05823 741 aaKnown RBP36.03■■■■□ 3.36
CSNK1E-204ENST00000403904 NAB2Q15742 525 aa36.03■■■■□ 3.36
CSNK1E-204ENST00000403904 TDHQ8IZJ6 230 aa36.03■■■■□ 3.36
CSNK1E-204ENST00000403904 SLC35C1Q96A29 364 aa36.03■■■■□ 3.36
CSNK1E-204ENST00000403904 MMRN2Q9H8L6 949 aa36.03■■■■□ 3.36
CSNK1E-204ENST00000403904 INTS13Q9NVM9 706 aa36.03■■■■□ 3.36
CSNK1E-204ENST00000403904 HCSTQ9UBK5 93 aa36.03■■■■□ 3.36
CSNK1E-204ENST00000403904 TUBGCP4Q9UGJ1 667 aa36.03■■■■□ 3.36
CSNK1E-204ENST00000403904 ENPEPQ07075 957 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 ZNF280BQ86YH2 543 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 TSPAN18Q96SJ8 248 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 MRPL9Q9BYD2 267 aaKnown RBP36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 MTMR12Q9C0I1 747 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 INSL6Q9Y581 213 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 UTP18Q9Y5J1 556 aaKnown RBP eCLIP36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 TLL1O43897 1013 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 GUCY2FP51841 1108 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 RABGGTBP53611 331 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 TPM4P67936 248 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 SOX4Q06945 474 aaPredicted RBP36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 PPP3CAQ08209 521 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 BTG3Q14201 252 aaPredicted RBP36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 NT5DC4Q86YG4 428 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 RSPH1Q8WYR4 309 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 RAD9AQ99638 391 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 TUBGCP2Q9BSJ2 902 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 PRO3102Q9H379 93 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 GOLGA2P5Q9HBQ8 144 aa36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 UBQLN1Q9UMX0 589 aaKnown RBP36.02■■■■□ 3.36
CSNK1E-204ENST00000403904 DDHD2O94830 711 aa36.01■■■■□ 3.35
CSNK1E-204ENST00000403904 TMEM191BP0C7N4 346 aa36.01■■■■□ 3.35
CSNK1E-204ENST00000403904 DUOXA2Q1HG44 320 aa36.01■■■■□ 3.35
CSNK1E-204ENST00000403904 LRRC43Q8N309 656 aa36.01■■■■□ 3.35
CSNK1E-204ENST00000403904 CACTINQ8WUQ7 758 aaKnown RBP36.01■■■■□ 3.35
CSNK1E-204ENST00000403904 SLC38A7Q9NVC3 462 aa36.01■■■■□ 3.35
CSNK1E-204ENST00000403904 B4GALT3O60512 393 aa36■■■■□ 3.35
CSNK1E-204ENST00000403904 GCLMP48507 274 aa36■■■■□ 3.35
CSNK1E-204ENST00000403904 KRT31Q15323 416 aa36■■■■□ 3.35
CSNK1E-204ENST00000403904 CMTR2Q8IYT2 770 aaKnown RBP36■■■■□ 3.35
CSNK1E-204ENST00000403904 ANKRD36BP1Q96IX9 119 aa36■■■■□ 3.35
CSNK1E-204ENST00000403904 CACNG4Q9UBN1 327 aa36■■■■□ 3.35
CSNK1E-204ENST00000403904 GBF1Q92538 1859 aa36■■■■□ 3.35
CSNK1E-204ENST00000403904 PRKCSHP14314 528 aaPredicted RBP35.99■■■■□ 3.35
CSNK1E-204ENST00000403904 BEST2Q8NFU1 509 aa35.99■■■■□ 3.35
CSNK1E-204ENST00000403904 FAM193BQ96PV7 902 aaPredicted RBP35.99■■■■□ 3.35
CSNK1E-204ENST00000403904 TAB2Q9NYJ8 693 aa35.99■■■■□ 3.35
CSNK1E-204ENST00000403904 XPOTO43592 962 aaKnown RBP35.98■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms